Locus |
Common name |
Short description |
AT4G37750 |
DRG, CKC1, ANT |
DRAGON, COMPLEMENTING A PROTEIN KINASE C MUTANT 1, AINTEGUMENTA, Integrase-type DNA-binding superfamily protein (.1) |
>AT4G37750.1 CDS map
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Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HpaI, HphI, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, NaeI, , NarI, NciI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XcmI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
1389, 1519 |
AciI
| C|CGC |
1437 |
AflII
| C|TTAAG |
1606 |
AflIII
| A|CPuPyGT |
245 |
AluI
| AG|CT |
109, 136, 292, 404, 473, 590, 620, 700, 889, 979, 1261, 1270, 1602 |
AlwNI
| CAGNNN|CTG |
586 |
ApoI
| Pu|AATTPy |
574 |
AvaI
| C|PyCGPuG |
986, 1489 |
AvaII
| G|G[AT]CC |
361, 1020 |
BanII
| GPuGCPy|C |
439, 603 |
BfaI
| C|TAG |
189, 507, 528, 618, 1089, 1137, 1359 |
BglII
| A|GATCT |
265, 304, 692, 1227 |
BlpI
| GC|TNAGC |
1601 |
BsaBI
| GATNN|NNATC |
29, 1346 |
BsaJI
| C|CNNGG |
395, 606, 852, 1236, 1299, 1579 |
BslI
| CCNNNNN|NNGG |
228 |
BsoBI
| C|PyCGPuG |
986, 1489 |
Bsp1286I
| G[GAT]GC[CAT]|C |
439, 603 |
BspDI
| AT|CGAT |
820 |
BspHI
| T|CATGA |
435 |
BsrFI
| Pu|CCGGPy |
1638 |
BsrI
| ACTGGN| |
631, 877, 1016 |
BssKI
| |CCNGG |
606 |
BstF5I
| GGATGNN| |
775 |
BstNI
| CC|[AT]GG |
606 |
BstUI
| CG|CG |
1389, 1519 |
BstYI
| Pu|GATCPy |
214, 265, 304, 399, 692, 1227 |
BtgI
| C|CPuPyGG |
395, 1299 |
BtsI
| GCAGTGNN| |
1129 |
Cac8I
| GCN|NGC |
1194 |
Cfr10I
| [AG]|CCGG[TC] |
1638 |
ClaI
| AT|CGAT |
820 |
DdeI
| C|TNAG |
261, 402, 407, 588, 1600, 1630 |
DpnI
| GA-CH3|TC |
213, 264, 303, 398, 691, 995, 1226, 1346, 1551 |
DpnII
| |GATC |
213, 264, 303, 398, 691, 995, 1226, 1346, 1551 |
EcoO109I
| PuG|GNCCPy |
362, 1021 |
EcoRV
| GAT|ATC |
1327 |
Fnu4HI
| GC|NGC |
138, 622, 744, 981, 1002, 1263, 1284, 1647 |
HhaI
| GCG|C |
1388 |
HinP1I
| G|CGC |
1388 |
HindIII
| A|AGCTT |
1271 |
HinfI
| G|ANTC |
232, 317, 330, 1162, 1210, 1495, 1574, 1659 |
HpaII
| C|CGG |
1508, 1637 |
Hpy188I
| TCN|GA |
262, 267, 696, 791, 1058, 1549, 1631 |
Hpy99I
| CG[AT]CG| |
733, 1613 |
HpyCH4III
| ACN|GT |
581, 928, 1611 |
HpyCH4V
| TG|CA |
139, 623, 1003, 1105, 1264 |
MboI
| |GATC |
213, 264, 303, 398, 691, 995, 1226, 1346, 1551 |
MseI
| T|TAA |
284, 552, 1290, 1533, 1605 |
MslI
| CAPyNN|NNPuTG |
250, 1181 |
MspA1I
| C[AC]G|C[GT]G |
137 |
MspI
| C|CGG |
1508, 1637 |
MwoI
| GCNNNNN|NNGC |
631, 987, 1269, 1446, 1518, 1634, 1653 |
N.BstNBI
| GAGTCNNNN|N |
1167, 1215, 1579 |
NcoI
| C|CATGG |
395 |
NdeI
| CA|TATG |
992 |
NlaIII
| CATG| |
244, 394, 434, 494, 539, 598, 1075, 1084, 1181, 1354 |
NlaIV
| GGN|NCC |
361, 1020, 1249, 1465 |
NspI
| PuCATG|Py |
245 |
PaeR7I
| C|TCGAG |
986 |
PciI
| A|CATGT |
245 |
PpuMI
| PuG|G[AT]CCPy |
362, 1021 |
PspGI
| |CC[AT]GG |
606 |
PstI
| CTGCA|G |
1265 |
PvuII
| CAG|CTG |
137 |
RsaI
| GT|AC |
1012, 1336, 1482 |
Sau3AI
| |GATC |
213, 264, 303, 398, 691, 995, 1226, 1346, 1551 |
Sau96I
| G|GNCC |
361, 1020 |
ScaI
| AGT|ACT |
1013, 1483 |
ScrFI
| CC|NGG |
606 |
SfcI
| C|TPuPyAG |
1155, 1265 |
SmlI
| C|TPyPuAG |
986, 1009, 1500, 1529, 1606 |
StyI
| C|C[AT][AT]GG |
395, 1236, 1579 |
Taqƒ¿I
| T|CGA |
314, 819, 985 |
TfiI
| G|A[AT]TC |
232, 317, 330, 1659 |
TliI
| C|TCGAG |
986 |
TseI
| G|C[AT]GC |
138, 622, 747, 981, 1002, 1263, 1284, 1647 |
Tsp45I
| |GT[CG]AC |
181, 382, 584, 611, 925, 1164, 1314 |
Tsp509I
| |AATT |
47, 512, 573, 1037, 1052, 1288 |
TspRI
| NNCA[CG]TGNN| |
588, 631, 1129 |
XhoI
| C|TCGAG |
986 |
XmnI
| GAANN|NNTTC |
237 |
Click here to view TAIR data
>AT4G37750.1 length:1668
ATGAAGTCTT TTTGTGATAA TGATGATAAT AATCATAGCA ACACGACTAA | 50 |
TTTGTTAGGG TTCTCATTGT CTTCAAATAT GATGAAAATG GGAGGTAGAG | 100 |
GAGGTAGAGA AGCTATTTAC TCATCTTCAA CTTCTTCAGC TGCAACTTCT | 150 |
TCTTCTTCTG TTCCACCTCA ACTTGTTGTT GGTGACAACA CTAGCAACTT | 200 |
TGGTGTTTGC TATGGATCTA ACCCAAATGG AGGAATCTAT TCTCACATGT | 250 |
CTGTGATGCC ACTCAGATCT GATGGTTCTC TTTGCTTAAT GGAAGCTCTC | 300 |
AACAGATCTT CTCACTCGAA TCACCATCAA GATTCATCTC CAAAGGTGGA | 350 |
GGATTTCTTT GGGACCCATC ACAACAACAC AAGTCACAAA GAAGCCATGG | 400 |
ATCTTAGCTT AGATAGTTTA TTCTACAACA CCACTCATGA GCCCAACACG | 450 |
ACTACAAACT TTCAAGAGTT CTTTAGCTTC CCTCAAACCA GAAACCATGA | 500 |
GGAAGAAACT AGAAATTACG GGAATGACCC TAGTTTGACA CATGGAGGGT | 550 |
CTTTTAATGT AGGGGTATAT GGGGAATTTC AACAGTCACT GAGCTTATCC | 600 |
ATGAGCCCTG GGTCACAATC TAGCTGCATC ACTGGCTCTC ACCACCACCA | 650 |
ACAAAACCAA AACCAAAACC ACCAAAGCCA AAACCACCAG CAGATCTCTG | 700 |
AAGCTCTTGT GGAGACAAGC GTTGGGTTTG AGACGACGAC AATGGCGGCT | 750 |
GCGAAGAAGA AGAGGGGACA AGAGGATGTT GTAGTTGTTG GTCAGAAACA | 800 |
GATTGTTCAT AGAAAATCTA TCGATACTTT TGGACAACGA ACTTCTCAAT | 850 |
ACCGAGGCGT TACAAGACAT AGATGGACTG GTAGATATGA AGCTCATCTA | 900 |
TGGGACAATA GTTTCAAGAA GGAAGGTCAC AGTAGAAAAG GAAGACAAGT | 950 |
TTATCTGGGA GGTTATGATA TGGAGGAGAA AGCTGCTCGA GCATATGATC | 1000 |
TTGCTGCACT CAAGTACTGG GGTCCCTCTA CTCACACCAA TTTCTCTGCG | 1050 |
GAGAATTATC AGAAAGAGAT TGAAGACATG AAGAACATGA CTAGACAAGA | 1100 |
ATATGTTGCA CATTTGAGAA GGAAGAGCAG TGGTTTCTCT AGGGGTGCTT | 1150 |
CCATCTATAG AGGAGTCACA AGACATCACC AGCATGGAAG GTGGCAAGCA | 1200 |
CGGATTGGTA GAGTCGCTGG AAACAAAGAT CTCTACCTTG GAACTTTTGG | 1250 |
AACCCAAGAA GAAGCTGCAG AAGCTTACGA TGTAGCAGCA ATTAAGTTCC | 1300 |
GTGGCACAAA TGCTGTGACT AACTTTGATA TCACGAGGTA CGATGTTGAT | 1350 |
CGTATCATGT CTAGTAACAC ACTCTTGTCT GGAGAGTTAG CGCGAAGGAA | 1400 |
CAACAACAGC ATTGTCGTCA GGAATACTGA AGACCAAACC GCTCTAAATG | 1450 |
CTGTTGTGGA AGGTGGTTCC AACAAAGAAG TCAGTACTCC CGAGAGACTC | 1500 |
TTGAGTTTTC CGGCGATTTT CGCGTTGCCT CAAGTTAATC AAAAGATGTT | 1550 |
CGGATCAAAT ATGGGCGGAA ATATGAGTCC TTGGACATCA AACCCTAATG | 1600 |
CTGAGCTTAA GACCGTCGCT CTTACTTTGC CTCAGATGCC GGTTTTCGCT | 1650 |
GCTTGGGCTG ATTCTTGA | 1700 |
>AT4G37750.1 longest ORF length:555
MKSFCDNDDN NHSNTTNLLG FSLSSNMMKM GGRGGREAIY SSSTSSAATS | 50 |
SSSVPPQLVV GDNTSNFGVC YGSNPNGGIY SHMSVMPLRS DGSLCLMEAL | 100 |
NRSSHSNHHQ DSSPKVEDFF GTHHNNTSHK EAMDLSLDSL FYNTTHEPNT | 150 |
TTNFQEFFSF PQTRNHEEET RNYGNDPSLT HGGSFNVGVY GEFQQSLSLS | 200 |
MSPGSQSSCI TGSHHHQQNQ NQNHQSQNHQ QISEALVETS VGFETTTMAA | 250 |
AKKKRGQEDV VVVGQKQIVH RKSIDTFGQR TSQYRGVTRH RWTGRYEAHL | 300 |
WDNSFKKEGH SRKGRQVYLG GYDMEEKAAR AYDLAALKYW GPSTHTNFSA | 350 |
ENYQKEIEDM KNMTRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA | 400 |
RIGRVAGNKD LYLGTFGTQE EAAEAYDVAA IKFRGTNAVT NFDITRYDVD | 450 |
RIMSSNTLLS GELARRNNNS IVVRNTEDQT ALNAVVEGGS NKEVSTPERL | 500 |
LSFPAIFALP QVNQKMFGSN MGGNMSPWTS NPNAELKTVA LTLPQMPVFA | 550 |
AWADS | 600 |
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