fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G37780 ATMYB87 myb domain protein 87 (.1)

>AT4G37780.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 498
NcoI C|CATGG 46, 521
PvuII CAG|CTG 611
SalI G|TCGAC 51
SpeI A|CTAGT 667
StyI C|C[AT][AT]GG 46, 521


Click here to view TAIR data

>AT4G37780.1 length:918
ATGGGAAGAG CACCGTGCTG CGACAAGATG GCGGTGAAGA AAGGGCCATG 
50
GTCGACGGAG GAAGATGCCG TGCTTAAGTC TTACATCGAA AAACACGGCA 
100
CCGGCAACAA CTGGATTTCC CTCCCTCAGA GAATTGGGAT AAAGAGGTGC 
150
GGGAAGAGTT GTCGTTTGAG ATGGCTTAAT TACTTGAGGC CTAACTTAAA 
200
GCATGGAGGC TTCACCGATG AAGAAGATTA CATCATTTGC AGCCTTTACA 
250
TTACTATTGG AAGCAGGTGG TCTATCATTG CTTCACAATT ACCGGGAAGA 
300
ACAGACAACG ACATCAAAAA CTATTGGAAC ACGAGGCTGA AGAAGAAGCT 
350
ATTGAGCAAG CAAGGGAAGG CATTTCATCA ACAACTTAAT GTCAAATTTG 
400
AGCGTGGAAC AACATCATCA TCATCGAGTC AGAACCAGAT CCAAATCTTT 
450
CATGATGAGA ACACCAAATC GAACCAAACA TTATATAATC AAGTGGTGGA 
500
TCCATCAATG AGAGCTTTTG CCATGGAAGA ACAAAGCATG ATCAAGAATC 
550
AGATATTGGA ACCATTTTCT TGGGAACCAA ACAAGGTTTT GTTTGATGTT 
600
GATTATGATG CAGCTGCTTC ATCTTATCAT CATCATGCAT CCCCATCATT 
650
GAACTCCATG AGCAGTACTA GTAGTATTGG TACTAATAAT TCATCTTTAC 
700
AAATGTCTCA CTACACCGTC AATCACAATG ATCATGATCA ACCAGATATG 
750
TTCTTTATGG ACGGGTTTGA GAATTTCCAG GCCGAGCTAT TTGATGAGAT 
800
AGCCAACAAC AACACGGTAG AAAATGGCTT TGACGGAACC GAGATCCTGA 
850
TCAATAACAA CTACTTGGAT CACGATATTA GCTCCTTCAT TGATTATCCT 
900
CTATACGATA ATGAGTAG
950

>AT4G37780.1 longest ORF length:305
MGRAPCCDKM AVKKGPWSTE EDAVLKSYIE KHGTGNNWIS LPQRIGIKRC 
50
GKSCRLRWLN YLRPNLKHGG FTDEEDYIIC SLYITIGSRW SIIASQLPGR 
100
TDNDIKNYWN TRLKKKLLSK QGKAFHQQLN VKFERGTTSS SSSQNQIQIF 
150
HDENTKSNQT LYNQVVDPSM RAFAMEEQSM IKNQILEPFS WEPNKVLFDV 
200
DYDAAASSYH HHASPSLNSM SSTSSIGTNN SSLQMSHYTV NHNDHDQPDM 
250
FFMDGFENFQ AELFDEIANN NTVENGFDGT EILINNNYLD HDISSFIDYP 
300
LYDNE
350