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| Locus | Common name | Short description |
| AT4G38070 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT4G38070.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NotI, PacI, SalI, SmaI, SpeI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 1277, 3572 |
| EcoRI | G|AATTC | 805, 2167 |
| HindIII | A|AGCTT | 49, 280, 604, 658, 2252 |
| HpaI | GTT|AAC | 145, 2620 |
| NcoI | C|CATGG | 3770 |
| NdeI | CA|TATG | 596, 1901, 2476 |
| NheI | G|CTAGC | 3477 |
| PstI | CTGCA|G | 2599 |
| PvuII | CAG|CTG | 3238 |
| SacI | GAGCT|C | 1134, 1876 |
| StyI | C|C[AT][AT]GG | 1433, 3770 |
| XbaI | T|CTAGA | 181, 1576, 2112 |
| XhoI | C|TCGAG | 2218 |
Click here to view TAIR data
>AT4G38070.1 length:4542
ATGGAGAAGG TTTATGAAGA GCTTGATGAA GTGAAAGCTG TGAATGAGAA | 50 |
GCTTAGGATT GACTATAGAA ACAAAACGGA GCTTCTTGAG AATCTAAAAA | 100 |
AGGTTCAGAA CGAACAATTA ATAGAGATTC GAGAGGCGAG ACTGGTTAAC | 150 |
GAGAAGCATG GTTTTGAGAT TGAGGAGAAA TCTAGAGAAA TTGCCGAGTT | 200 |
GAAGCGAGCG AACGAGGAAC TACAACGTTG TTTGAGAGAG AAGGATTCTG | 250 |
TTGTCAAGCG TGTGAATGAT GTGAATGATA AGCTTAGAGC TAACGGGGAA | 300 |
GATAAGTACC GGGAATTTGA AGAGGAGAAA CGAAATATGA TGTCTGGTTT | 350 |
GGATGAAGCT AGTGAGAAGA ACATTGATCT TGAGCAGAAA AATAATGTCT | 400 |
ATAGAGCTGA GATTGAGGGG CTCAAAGGGC TTTTAGCTGT AGCGGAGACG | 450 |
AAAAGGATTG AAGCTGAGAA AACTGTTAAA GGTATGAAGG AAATGAGAGG | 500 |
AAGAGATGAT GTAGTGGTTA AGATGGAGGA GGAGAAGAGT CAAGTAGAAG | 550 |
AGAAGCTGAA ATGGAAGAAG GAGCAGTTTA AGCATCTTGA GGAAGCATAT | 600 |
GAGAAGCTTA AGAATCTGTT TAAGGATAGC AAGAAAGAGT GGGAGGAAGA | 650 |
AAAATCAAAG CTTTTAGATG AAATCTACTC TCTTCAGACC AAGCTGGATT | 700 |
CAGTAACTAG AATCTCAGAG GATCTTCAGA AGAAGTTGCA GATGTGTAAC | 750 |
GGTGCGTTGA CACAGGAAGA GACCAGAAGA AAACATCTTG AAATCCAAGT | 800 |
TTCTGAATTC AAAGCCAAAT ACGAAGATGC TTTTGCAGAG TGCCAAGACG | 850 |
CAAGAACACA GCTTGATGAT TTGGCTGGTA AAAGAGATTG GGAAGTTGCA | 900 |
GAGTTGAGAC AGACCTTGAG CATGAAAGAT GCATATTTTA AGGAGATGAA | 950 |
GTATGAGAAT GGAAAACTAG AACAAGAAAA CCGCGAGTTG CTGGGTTCGT | 1000 |
TGAAAGAACT CCAGGAAGCT ACAATTCAGG GATCAGGAAA CTCTGCACTA | 1050 |
TCAAAGCTGA AAAACAAGTT TCGGAACTTG GAAAACATAC ACAAGAACTG | 1100 |
TTCAGCTAAT TTAAGAAGTA AAGAAGCTGA ATGGAGCTCT CAAGTGGAGA | 1150 |
AGATGGTAGA AGAGATTAAT GATTATAAGT TGCAGTTGCA AAGCAAGGAG | 1200 |
GCAGCCTTGA AAGAGGTTGA GTTGGAACTT GAAAATTGTC GCTCTTCTAC | 1250 |
AGCTAAAATG AGACTACAGT ATGAAGAGAT CTCGATTATG TTTTTAGTGC | 1300 |
TAAGTAGAAC GGTCTCCGAG GCTCAGTCAA GGCTTGCGAA TGCTAAGGAT | 1350 |
AAGCAAATCA AGGATGAAAA AAGAGAAGGA AATTGCTATT CTCTATTGAT | 1400 |
GGAGCAGCTA GATCAAAAGA ATGCTGCACT GGCCAAGGCG CAGATGGAGA | 1450 |
TTAAAGAAGA GCGCGAAAGC GTTGCGTGTT TGCTGAAAAG AATAGAAATG | 1500 |
CTGGATCTTT TCGAAAACCA GAATATTCAG ATGCAGAAAG AGGTAGAGAG | 1550 |
GTTCAAAGAA ATGGTTGAGG AATCATCTAG ATTCCAAACT CAGATGCAAG | 1600 |
AAAAAATGAA AGAAGCTGAA AATGATTATG AAGAGAAACT TCTTCAAGTC | 1650 |
TGTGATGCAT TGGACAACAC AAACATAGAC CTCGTTGCAG AACGCGAGAA | 1700 |
GGTGGTGTCT TTAACAAGGC AGATTGAGTC ACTTGGTACT GTCAAAGAGA | 1750 |
AGAATTTAGT GATGGAAAAA GAAACTCAGG AGTATAAGGA GATGCTGGAG | 1800 |
GAATCAGAAA AGTGTCGGGT GCTTTTAGAG GAGCAGATTT CGCAGCTTGA | 1850 |
AAGTGATTCC AACGAGAATA TTAGAGAGCT CTGTAGCAAG GTGGACATTG | 1900 |
CATATGCCAA GTTGGCAGAA GAGGTTGAGA AGACTGCCTC ATTGGTTAGA | 1950 |
AAAAGTGAGT CTATTGATCT AAACGAAGAG CATAGGCAAC GGGAGCTTGA | 2000 |
TCATTACAAG GAAATGCTTG AGGAGTCTAC CAAAACTCAA CTTCTCTTGC | 2050 |
AAGAGAAAGT TGTAGATGTG GAAAACGACT CGAAGAGGAA ACTTGCTGAC | 2100 |
GTTTCTGAGG CTCTAGAGAT AGCAAATTCT GAATTATCTG ATAAAACCTC | 2150 |
TGAAGTGTTC CAGATTGAAT TCCAATTGTG GGTCTGGAAA TCTATTGCTA | 2200 |
AAAGGCTAAA AGCTGAACTC GAGCAAAACC AGAACCTGCG GAAAAGAGTA | 2250 |
GAAGCTTCTC TTCTTGAACA GGTTGGAGTT GGAGAAGCCA TTAAGCAAGA | 2300 |
GAAGAATGAG TTGGTGCATA AGCTAAAGGT TATCAGCCAT GCAAGATCGT | 2350 |
CTGATTCAGA GAAGAAAGAA TCCCTTATGA GGGATAAGGA CGAGATGTTG | 2400 |
GAAAGTCTAC AGAGAGAGGT AGAGTTGTTG GAACAAGACT CACTTAGAAG | 2450 |
GGAGCTTGAG GATGTCGTTC TTGCGCATAT GATTGGTGAA AGGGAATTGC | 2500 |
AGAACGAGAG AGAGATTTGT GCTTTACAAC AGAAAGACCA GGACTTATGT | 2550 |
GAAGTGAAGC ATGAATTGGA GGGTTCATTA AAGTCTGTAT CTTTGCTGCT | 2600 |
GCAGCAGAAG CAAAACGAGG TTAACATGCT TCGCAAAACA TGGGAGAAAC | 2650 |
TCACTGCTAG GCAAATTCTT ACTGCGGTGG AAACAGAATC GAAAAAGATG | 2700 |
ATGATCATAG AGCTTGAAGG GGAAATCTCT AGTCTCAGCC AGAAACTGGA | 2750 |
AACGTCGAAT GAATCTGTTT CTTGTTTCAG ACAAGAAGCA ACAAAGTCAA | 2800 |
GAGCCGAATT GGAAACTAAG CAGACAGAGT TGAAAGAAGT AACCACACAA | 2850 |
ATGCAGGAAA AGCTAAGAAC TTCAGAAGCA GAGAAGACAG AGTTAGTTAA | 2900 |
GGAAGTCGCG AGTTTGTCAA CAGAAAAACG AAATCTTTTG AGTTTTATCA | 2950 |
GCGAAATGGA GGATGGAATG TTGAAGCTGT ATGATGGAGA CACGAAGCTG | 3000 |
ATGAAAACTT TGGAGAGAGT TACACAATGT TGTGATGGAT TTGGTAAAGA | 3050 |
GAACAATAAT GGTGAAACTA TTGGTTCTCC AAGATTGGCA ATGAAGCATG | 3100 |
AAGAAGATGT TGTAACTGAA GACAGAGAAG GTGCTTCGCA GAACCGCACA | 3150 |
GCACCCGACT TAAAACCGAT CGAAACGTGC CGTAAACTCC TCAAATCACG | 3200 |
TGAGTTTCTC AGCGTTCGGT ATATCATTCA AGTGAATCAG CTGCTAAAAA | 3250 |
GTAAACGGCA TGATGATGAT GATCAGTTTG AGCAAGTGGA AGCCATCTGC | 3300 |
GACCTTCTCA TCGCCGCAGA AAACCGGCTT CCAAACGGTT TAAAGGATTA | 3350 |
TTACGGCATG ATTCGGGCGA ACCGATTCGG ACCAGTTTTA TTGGAGGACT | 3400 |
TCGAGAAATT GACGAAACTT CTTGATAAGA AGCATAACTA TTTCCCATTT | 3450 |
AGCCAAGAAG CTGCTGATAA AGCCTCGCTA GCTTGGTCTC TGCTGTCTAA | 3500 |
GCCACCCATC AAAGCCCATT ACGATCTTGC TATCTCCGCA TTTTTCGGAG | 3550 |
AGTGTAGCAA AGTAAAACGA AAGATCTTTA TCCCCAAGAA ACAAATTGAG | 3600 |
GTAGTGGTTA TTTCCGATGA CGACGACGAG GAGGAATTTT CATGTCTGAA | 3650 |
AATCTCTCTC AATCGTTATT ATTATTATGA TTATCTCCTC TTTGTCTTTA | 3700 |
TATATATATA TATACACAAC AAATTTAACA TTCCCTCCAA TGTCCTACTG | 3750 |
TCTCCTTCTC TGTGTGTTAC CATGGTTTTA CTTCACCATG TAAGTCTCTC | 3800 |
TCATTATCAA AATTCATCTT CTCTGTTTTC TTCCTCCTCT GAATCAATCC | 3850 |
TTTGTTTATT TCTTGTGTTG TGTGTGATGC AGTTAGAGCA AGGGATGCGT | 3900 |
CCGATTTCAC GATGTTACAA TCCAACCGCG TATTCGACAA CAATGGGAAG | 3950 |
AAGTTTCTTC GCAGGTGCAG CCACAAGCAG CAAGCTATTC TCCAGAGGTT | 4000 |
TCTCAGTCAC AAAGCCAAAA TCTAAAACCG AATCTAAAGA AGTTGCTGCA | 4050 |
AAGAAACATA GTGACGCAGA GAGAAGGAGA CGGCTTCGGA TTAATTCCCA | 4100 |
GTTTGCAACT CTCCGCACCA TTCTTCCAAA CTTAGTCAAA CAAGATAAAG | 4150 |
CATCTGTGCT TGGAGAGACT GTCAGGTACT TCAATGAATT GAAAAAGATG | 4200 |
GTTCAAGACA TACCAACCAC ACCATCTTTA GAAGACAACT TGAGATTGGA | 4250 |
CCACTGTAAT AACAACAGAG ACTTGGCAAG AGTCGTGTTC AGTTGTAGCG | 4300 |
ACAGAGAAGG GCTAATGTCG GAGGTTGCAG AGTCAATGAA AGCAGTGAAA | 4350 |
GCAAAGGCGG TGAGAGCTGA GATCATGACA GTAGGTGGAA GAACCAAGTG | 4400 |
TGCCTTGTTT GTTCAAGGTG TCAATGGGAA TGAAGGATTG GTGAAGCTCA | 4450 |
AGAAATCGTT GAAACTTGTA GTGAATGGTA AATCATCATC AGAGGCGAAA | 4500 |
AACAACAACA ATGGAGGATC GTTGTTAATT CAGCAGCAAT GA | 4550 |
>AT4G38070.1 longest ORF length:1513
MEKVYEELDE VKAVNEKLRI DYRNKTELLE NLKKVQNEQL IEIREARLVN | 50 |
EKHGFEIEEK SREIAELKRA NEELQRCLRE KDSVVKRVND VNDKLRANGE | 100 |
DKYREFEEEK RNMMSGLDEA SEKNIDLEQK NNVYRAEIEG LKGLLAVAET | 150 |
KRIEAEKTVK GMKEMRGRDD VVVKMEEEKS QVEEKLKWKK EQFKHLEEAY | 200 |
EKLKNLFKDS KKEWEEEKSK LLDEIYSLQT KLDSVTRISE DLQKKLQMCN | 250 |
GALTQEETRR KHLEIQVSEF KAKYEDAFAE CQDARTQLDD LAGKRDWEVA | 300 |
ELRQTLSMKD AYFKEMKYEN GKLEQENREL LGSLKELQEA TIQGSGNSAL | 350 |
SKLKNKFRNL ENIHKNCSAN LRSKEAEWSS QVEKMVEEIN DYKLQLQSKE | 400 |
AALKEVELEL ENCRSSTAKM RLQYEEISIM FLVLSRTVSE AQSRLANAKD | 450 |
KQIKDEKREG NCYSLLMEQL DQKNAALAKA QMEIKEERES VACLLKRIEM | 500 |
LDLFENQNIQ MQKEVERFKE MVEESSRFQT QMQEKMKEAE NDYEEKLLQV | 550 |
CDALDNTNID LVAEREKVVS LTRQIESLGT VKEKNLVMEK ETQEYKEMLE | 600 |
ESEKCRVLLE EQISQLESDS NENIRELCSK VDIAYAKLAE EVEKTASLVR | 650 |
KSESIDLNEE HRQRELDHYK EMLEESTKTQ LLLQEKVVDV ENDSKRKLAD | 700 |
VSEALEIANS ELSDKTSEVF QIEFQLWVWK SIAKRLKAEL EQNQNLRKRV | 750 |
EASLLEQVGV GEAIKQEKNE LVHKLKVISH ARSSDSEKKE SLMRDKDEML | 800 |
ESLQREVELL EQDSLRRELE DVVLAHMIGE RELQNEREIC ALQQKDQDLC | 850 |
EVKHELEGSL KSVSLLLQQK QNEVNMLRKT WEKLTARQIL TAVETESKKM | 900 |
MIIELEGEIS SLSQKLETSN ESVSCFRQEA TKSRAELETK QTELKEVTTQ | 950 |
MQEKLRTSEA EKTELVKEVA SLSTEKRNLL SFISEMEDGM LKLYDGDTKL | 1000 |
MKTLERVTQC CDGFGKENNN GETIGSPRLA MKHEEDVVTE DREGASQNRT | 1050 |
APDLKPIETC RKLLKSREFL SVRYIIQVNQ LLKSKRHDDD DQFEQVEAIC | 1100 |
DLLIAAENRL PNGLKDYYGM IRANRFGPVL LEDFEKLTKL LDKKHNYFPF | 1150 |
SQEAADKASL AWSLLSKPPI KAHYDLAISA FFGECSKVKR KIFIPKKQIE | 1200 |
VVVISDDDDE EEFSCLKISL NRYYYYDYLL FVFIYIYIHN KFNIPSNVLL | 1250 |
SPSLCVTMVL LHHVSLSHYQ NSSSLFSSSS ESILCLFLVL CVMQLEQGMR | 1300 |
PISRCYNPTA YSTTMGRSFF AGAATSSKLF SRGFSVTKPK SKTESKEVAA | 1350 |
KKHSDAERRR RLRINSQFAT LRTILPNLVK QDKASVLGET VRYFNELKKM | 1400 |
VQDIPTTPSL EDNLRLDHCN NNRDLARVVF SCSDREGLMS EVAESMKAVK | 1450 |
AKAVRAEIMT VGGRTKCALF VQGVNGNEGL VKLKKSLKLV VNGKSSSEAK | 1500 |
NNNNGGSLLI QQQ | 1550 |