fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G38620 AtMYB4 myb domain protein 4 (.1)

>AT4G38620.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 112
HindIII A|AGCTT 343, 504, 831
SacI GAGCT|C 601


Click here to view TAIR data

>AT4G38620.1 length:849
ATGGGAAGGT CACCGTGCTG TGAGAAAGCT CACACAAACA AAGGAGCATG 
50
GACGAAAGAA GAGGACGAGA GGCTCGTCGC CTACATTAAA GCTCATGGAG 
100
AAGGCTGCTG GAGATCTCTC CCCAAAGCCG CCGGACTTCT TCGCTGTGGC 
150
AAGAGCTGCC GTCTCCGGTG GATCAACTAT CTCCGGCCTG ACCTTAAGCG 
200
TGGAAACTTC ACCGAGGAAG AAGACGAACT CATCATCAAG CTCCATAGCC 
250
TTCTTGGCAA CAAATGGTCG CTTATTGCCG GGAGATTACC GGGAAGAACA 
300
GATAACGAGA TAAAGAACTA TTGGAACACG CATATACGAA GAAAGCTTAT 
350
AAACAGAGGG ATTGATCCAA CGAGTCATAG ACCAATCCAA GAATCATCAG 
400
CTTCTCAAGA TTCTAAACCT ACACAACTAG AACCAGTTAC GAGTAATACC 
450
ATTAATATCT CATTCACTTC TGCTCCAAAG GTCGAAACGT TCCATGAAAG 
500
TATAAGCTTT CCGGGAAAAT CAGAGAAAAT CTCAATGCTT ACGTTCAAAG 
550
AAGAAAAAGA TGAGTGCCCA GTTCAAGAAA AGTTCCCAGA TTTGAATCTT 
600
GAGCTCAGAA TCAGTCTTCC TGATGATGTT GATCGTCTTC AAGGGCATGG 
650
AAAGTCAACA ACGCCACGTT GTTTCAAGTG CAGCTTAGGG ATGATAAACG 
700
GCATGGAGTG CAGATGCGGA AGAATGAGAT GCGATGTAGT CGGAGGTAGC 
750
AGCAAGGGGA GTGACATGAG CAATGGATTT GATTTTTTAG GGTTGGCAAA 
800
GAAAGAGACC ACTTCTCTTT TGGGCTTTCG AAGCTTGGAG ATGAAATAA
850

>AT4G38620.1 longest ORF length:282
MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG 
50
KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT 
100
DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT 
150
INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL 
200
ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS 
250
SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
300