|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT4G38900 | AtbZIP29 | Basic-leucine zipper (bZIP) transcription factor family protein (.1), Basic-leucine zipper (bZIP) transcription factor family protein (.2), Basic-leucine zipper (bZIP) transcription factor family protein (.3) |
>AT4G38900.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 873 |
| EcoRV | GAT|ATC | 523 |
| NcoI | C|CATGG | 1631 |
| PstI | CTGCA|G | 1121 |
| SmaI | CCC|GGG | 270 |
| StyI | C|C[AT][AT]GG | 1631 |
Click here to view TAIR data
>AT4G38900.1 length:1662
ATGGGTGATA CAGAGAAGTG TAACAGTGAT ATGATCCAGA GACTTCATTC | 50 |
ATCTTTCGGC ACTACTTCTT CTTCCATTCC CAAAAATCCC ATTTCTCAGC | 100 |
TCGATTTAAA CCCTAATTTC ATCCGCTCAT CAGCTCCTCA ATTCTCCAAG | 150 |
CCTTTCAGTG ACAGTGGCAA ACGAATCGGT GTTCCTCCGT CGCACCCCAA | 200 |
CTTAATCCCA CCGACTTCTC CGTTTTCTCA GATCCCGACC ACCCGACAAC | 250 |
CCGGTTCGCA TAATTTTAAC CCGGGAGGAG CTAATCATTC ACGGTCAATG | 300 |
TCACAGCCCA ACTCTTTCTT CTCTTTTGAC TCCTTACCTC CGTTAAGCCC | 350 |
TTCTCCGTTT CGAGATCACG ATGTTTCAAT GGAGGATAGA GATTCCGGCG | 400 |
TGTTTAACAG CAACCATTCG TTGCCTCCAT CGCCGTTCAC GAGGTGTAAT | 450 |
TCGACCTCTT CTAGCTCCTT GAGAGTCGGT GAGAGTTTAC CTCCGAGAAA | 500 |
GTCTCATAGA CGCTCCAACA GTGATATCCC CAGTGGGTTT AATTCGATGC | 550 |
CTTTGATCCC TCCGAGACCA TTGGAGAGGT CTTTTTCTGG TGGGGAGTGT | 600 |
GCTGATTGGT CAAAGTCTAA TCCTTTTGTG AAGAAGGAAT CGAGCTGCGA | 650 |
AAGGGAAGGT GTCGGAGAGA GAGAAGCTAT GGATGATCTC TTCTCAGCAT | 700 |
ATATGAATCT TGAAAACATT GATGTGTTGA ACTCCTCTGA AGCTGATGAT | 750 |
AGCAAGAACG GTAATGAGAA TAGGGATGAT ATGGAGAGCA GCAGAGCAAG | 800 |
CGGGACCAAG ACTAACGGTA GTGATACGGA AGGAGAGAGC AGCAGTGTCA | 850 |
ATGAGAGTGC CAATAATAAT ATGAATTCTT CTGGTGAAAA GAGAGAGAGC | 900 |
GTGAAGAGAA GAGCGGCTGG AGGAGATATT GCTCCTACCA CCAGACATTA | 950 |
CAGGAGTGTT TCAGTGGACA GTTGTTTCAT GGAGAAGTTG TCTTTTGGTG | 1000 |
ATGAATCTCT AAAGCCGCCT CCTTCTCCTG GATCTATGTC AAGGAAAGTT | 1050 |
TCCCCTACCA ATTCGGTTGA TGGGAACTCG GGTGCTGCTT TTAGCATCGA | 1100 |
GTTCAATAAC GGTGAGTTTA CTGCAGCGGA AATGAAGAAG ATCATGGCAA | 1150 |
ATGATAAACT AGCAGAGATG GCCATGTCTG ACCCTAAACG TGTCAAAAGG | 1200 |
AATGATCCTC TTTTCAGAAT CTTAGCGAAC CGTCAATCCG CAGCACGGTC | 1250 |
AAAGGAGAGG AAGATGCGGT ACATAGTAGA ATTGGAACAC AAAGTGCAGA | 1300 |
CTCTTCAGAC CGAGGCTACC ACATTGTCTG CTCAGCTCAC ACTTTTGCAG | 1350 |
CGCGATATGA TGGGGTTGAC AAATCAGAAC AATGAGCTTA AGTTCCGGCT | 1400 |
TCAAGCAATG GAGCAACAAG CGCGTCTTCG CGATGCTCTG AACGAAGCAC | 1450 |
TGAATGGAGA AGTCCAGCGA CTGAAACTGG CAATCGGTGA GAGCAGTCAG | 1500 |
AACGAATCAG AGAGATCAAA GATGCAATCA CTCAACGCTG AGATGTTCCA | 1550 |
GCAACTCAAC ATCAGCCAGT TAAGACAGCA GCCACAACAG ATGCAGCAAC | 1600 |
AGTCTCATCA GCAGAACCAC CAGAATGGAA CCATGGCAAC AAAATCTGAA | 1650 |
TCAAATGAAT AG | 1700 |
>AT4G38900.1 longest ORF length:553
MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK | 50 |
PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM | 100 |
SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN | 150 |
STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC | 200 |
ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD | 250 |
SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES | 300 |
VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV | 350 |
SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR | 400 |
NDPLFRILAN RQSAARSKER KMRYIVELEH KVQTLQTEAT TLSAQLTLLQ | 450 |
RDMMGLTNQN NELKFRLQAM EQQARLRDAL NEALNGEVQR LKLAIGESSQ | 500 |
NESERSKMQS LNAEMFQQLN ISQLRQQPQQ MQQQSHQQNH QNGTMATKSE | 550 |
SNE | 600 |