fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G39070 B-box zinc finger family protein (.1)

>AT4G39070.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 311
HindIII A|AGCTT 35
SacI GAGCT|C 417, 444


Click here to view TAIR data

>AT4G39070.1 length:729
ATGAAGATTT GGTGTGCTGT TTGTGATAAA GAAGAAGCTT CGGTGTTTTG 
50
TTGTGCGGAT GAAGCAGCTC TTTGTAATGG TTGCGATCGC CATGTTCATT 
100
TCGCCAATAA ACTAGCCGGG AAACATCTCC GGTTCTCTCT CACTTCTCCT 
150
ACTTTCAAAG ATGCTCCTCT TTGTGATATT TGCGGGGAGA GGCGTGCATT 
200
ATTATTTTGC CAAGAAGACA GAGCAATACT ATGCAGAGAA TGTGACATTC 
250
CAATACATCA AGCTAATGAG CACACTAAGA AACACAATAG ATTCCTCCTT 
300
ACCGGCGTTA AGATCTCTGC CTCCCCGTCA GCCTACCCAA GAGCCTCCAA 
350
TTCCAACTCT GCTGCTGCAT TTGGTCGAGC CAAAACCCGA CCAAAATCAG 
400
TATCGAGCGA GGTCCCGAGC TCGGCCTCCA ATGAGGTATT TACGAGCTCT 
450
TCTTCGACGA CCACGAGCAA TTGCTATTAT GGGATAGAAG AAAACTACCA 
500
TCACGTGAGC GATTCGGGGT CGGGATCGGG TTGTACAGGT AGTATATCCG 
550
AGTATTTGAT GGAGACATTA CCGGGTTGGA GAGTGGAGGA TTTGCTTGAA 
600
CACCCTTCTT GTGTCTCCTA TGAGGATAAC ATTATTACTA ATAACAATAA 
650
CAGTGAGTCT TATAGGGTTT ATGATGGTTC TTCACAATTC CATCATCAAG 
700
GGTTTTGGGA TCACAAACCC TTCTCTTGA
750

>AT4G39070.1 longest ORF length:242
MKIWCAVCDK EEASVFCCAD EAALCNGCDR HVHFANKLAG KHLRFSLTSP 
50
TFKDAPLCDI CGERRALLFC QEDRAILCRE CDIPIHQANE HTKKHNRFLL 
100
TGVKISASPS AYPRASNSNS AAAFGRAKTR PKSVSSEVPS SASNEVFTSS 
150
SSTTTSNCYY GIEENYHHVS DSGSGSGCTG SISEYLMETL PGWRVEDLLE 
200
HPSCVSYEDN IITNNNNSES YRVYDGSSQF HHQGFWDHKP FS
250