fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G39250 RSM2, ATRL1 RADIALIS-LIKE SANT/MYB 2, RAD-like 1 (.1)

>AT4G39250.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 295
SacI GAGCT|C 27
SpeI A|CTAGT 232


Click here to view TAIR data

>AT4G39250.1 length:303
ATGGCATCAA GCTCAATGTC TTCTCAGAGC TCTGGCTCGT GGACTGCTAA 
50
GCAGAACAAA GCCTTTGAGC AGGCTCTAGC AACCTATGAC CAGGACACTC 
100
CTAACCGTTG GCAAAATGTT GCCAAAGTCG TGGGTGGAAA AACAACAGAG 
150
GAGGTAAAGA GACACTACGA ACTCTTAGTG CAAGACATCA ACAGCATAGA 
200
GAACGGTCAT GTTCCATTCC CAAACTACAG GACTAGTGGA GGCTGCACTA 
250
ATGGCAGGCT TAGTCAGGAG GAAAAAAGGA TGAGAAACAT GAGGCTGCAG 
300
TAA
350

>AT4G39250.1 longest ORF length:100
MASSSMSSQS SGSWTAKQNK AFEQALATYD QDTPNRWQNV AKVVGGKTTE 
50
EVKRHYELLV QDINSIENGH VPFPNYRTSG GCTNGRLSQE EKRMRNMRLQ 
100