|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G01200 | Duplicated homeodomain-like superfamily protein (.1) |
>AT5G01200.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 625 |
| HindIII | A|AGCTT | 519 |
| HpaI | GTT|AAC | 637 |
| SalI | G|TCGAC | 9 |
| XbaI | T|CTAGA | 324 |
Click here to view TAIR data
>AT5G01200.1 length:804
ATGTCATCGT CGACGATGTA CAGAGGAGTT AATATGTTTT CACCGGCAAA | 50 |
CACAAACTGG ATTTTTCAAG AAGTCAGAGA AGCCACGTGG ACGGCGGAGG | 100 |
AGAACAAACG GTTCGAGAAA GCTCTCGCTT ATCTGGACGA CAAAGACAAT | 150 |
CTTGAGAGCT GGTCCAAGAT CGCAGATTTG ATTCCCGGCA AAACAGTAGC | 200 |
TGACGTCATT AAACGATACA AGGAGCTAGA GGATGATGTC AGCGACATCG | 250 |
AAGCCGGACT TATCCCCATT CCGGGATACG GCGGCGACGC CTCCTCCGCT | 300 |
GCAAACAGTG ACTATTTCTT TGGTCTAGAA AACTCCAGCT ACGGTTATGA | 350 |
TTACGTCGTT GGAGGAAAGA GGAGTTCGCC GGCGATGACT GATTGTTTTA | 400 |
GGTCTCCGAT GCCGGAAAAG GAGAGGAAGA AAGGAGTTCC GTGGACCGAG | 450 |
GACGAACACC TACGATTTCT GATGGGTTTG AAGAAATATG GAAAAGGAGA | 500 |
TTGGAGAAAC ATAGCAAAAA GCTTTGTGAC GACTCGAACG CCGACGCAAG | 550 |
TCGCTTCACA CGCTCAGAAA TATTTTCTTC GACAACTCAC AGATGGTAAA | 600 |
GACAAAAGAC GATCAAGTAT TCACGATATC ACCACTGTTA ACATCCCTGA | 650 |
CGCAGACGCA TCCGCAACCG CCACGACCGC TGACGTAGCA CTCTCTCCTA | 700 |
CTCCAGCCAA TTCTTTTGAC GTTTTCCTTC AGCCAAATCC TCATTACAGT | 750 |
TTCGCGTCTG CGTCTGCGTC TAGCTATTAT AATGCGTTTC CGCAGTGGAG | 800 |
TTAA | 850 |
>AT5G01200.1 longest ORF length:267
MSSSTMYRGV NMFSPANTNW IFQEVREATW TAEENKRFEK ALAYLDDKDN | 50 |
LESWSKIADL IPGKTVADVI KRYKELEDDV SDIEAGLIPI PGYGGDASSA | 100 |
ANSDYFFGLE NSSYGYDYVV GGKRSSPAMT DCFRSPMPEK ERKKGVPWTE | 150 |
DEHLRFLMGL KKYGKGDWRN IAKSFVTTRT PTQVASHAQK YFLRQLTDGK | 200 |
DKRRSSIHDI TTVNIPDADA SATATTADVA LSPTPANSFD VFLQPNPHYS | 250 |
FASASASSYY NAFPQWS | 300 |