Locus |
Common name |
Short description |
AT5G01840 |
AtOFP1 |
ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 (.1) |
>AT5G01840.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
621 |
EcoRI
| G|AATTC |
504 |
SalI
| G|TCGAC |
271 |
StyI
| C|C[AT][AT]GG |
175, 184 |
XbaI
| T|CTAGA |
693 |
Click here to view TAIR data
>AT5G01840.1 length:813
ATGGGTAATA ACTATCGGTT TAAGCTATCG GAGTTAATCC CTAACGCTTG | 50 |
GTTTTACAAA CTTAGAGACA TGTCCAAATC CAAGAAGAAG AATCTTCAGA | 100 |
GCCAACCAAA TAGCACCACC TCCAAGAAGA AACACCACGC AGTCCCTACT | 150 |
CCTACGTCCA CAACGCCACT CAGTCCTAGG CCTCCTAGGC GCCCTTCTCA | 200 |
CTCTTCCAAA GCGCCACCCT CCCATCCTCC CAGGAAGTCC TCCGGGAACC | 250 |
GTCTTCGTCA CCGAGCCACC GTCGACTCTA AGTCTTCCAC GACTTCCGGC | 300 |
GACAGCACTA CCACAGAAAC AGGTTCTTTC TCACCGGACT TTCGCTCGGA | 350 |
TCAAGTTCTC CTCCCCGACG AGTCATTAAC GGGCTCCTGG CACAGCCCTT | 400 |
GCAGCTCCAA GTTATCCAAA ACCGCAACCT TTACGCCGCC GCCGGAACTC | 450 |
GAACTCCGGC CCATCATTAC CAAAACGGCC GCCACCGCAC GGAAAACGGC | 500 |
GGTGAATTCT CCGGCGGGGG TGAGACTTAG AATGCGGTCG CCGCGGATCT | 550 |
CGGTGAGCAG CAGCGCAAGA AGAAGCGGGT CGTCGGCTCG GCGGAGCAGG | 600 |
GCGGTGGTGA AGGCGTCGGT GGATCCGAAG AGAGACTTTA AGGAGTCGAT | 650 |
GGAGGAGATG ATCGCTGAGA ACAAGATAAG AGCGACAAAG GATCTAGAGG | 700 |
AGCTTTTGGC TTGCTATCTC TGTCTCAATT CAGACGAATA TCACGCTATT | 750 |
ATCATCAATG TCTTCAAGCA AATCTGGCTT GATCTTAATC TTCCACCACC | 800 |
CCATTCCAAA TAA | 850 |
>AT5G01840.1 longest ORF length:270
MGNNYRFKLS ELIPNAWFYK LRDMSKSKKK NLQSQPNSTT SKKKHHAVPT | 50 |
PTSTTPLSPR PPRRPSHSSK APPSHPPRKS SGNRLRHRAT VDSKSSTTSG | 100 |
DSTTTETGSF SPDFRSDQVL LPDESLTGSW HSPCSSKLSK TATFTPPPEL | 150 |
ELRPIITKTA ATARKTAVNS PAGVRLRMRS PRISVSSSAR RSGSSARRSR | 200 |
AVVKASVDPK RDFKESMEEM IAENKIRATK DLEELLACYL CLNSDEYHAI | 250 |
IINVFKQIWL DLNLPPPHSK | 300 |
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