Locus |
Common name |
Short description |
AT5G01860 |
|
C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT5G01860.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
StyI
| C|C[AT][AT]GG |
73, 80 |
XbaI
| T|CTAGA |
552 |
Click here to view TAIR data
>AT5G01860.1 length:648
ATGGAACTAA ACCTCTCTAC ACCCACATCA TGTTCCTCCA GCAGCATCTC | 50 |
ATCATCTTCG CATGAGGCCA TCCCTAGGAC CAAGGGTAAA ACGAAAGAGG | 100 |
AGGTCACGGC TGAGCCGTCG AAGGAGAATC AGCAGCGGCT AGAGTTCCGC | 150 |
TTCCTGTTCA ACGAGAGTAG TACAAGAAAC GAGGCTAAAG CGAGGGTGTT | 200 |
TGCTTGCACC TTCTGCAAAA AAGAGTTCTC TACGTCTCAA GCCTTAGGAG | 250 |
GACATCAGAA CGCTCACAAG CAAGAGCGAT CATTGGCTAA AAGGCGTAAA | 300 |
GAGATCGAAA TCAACTATCC TGAACTCTCC ATCTACAGCC AGTACCCGCC | 350 |
AAGTGGACTT TCCTTCAGCA GCAGCTCCTC GCAGTATGAT CTCGGGGTTC | 400 |
GTTACAATCC TAACATTGCT AAAACTACTA AGCCCTATCC GTTCAACATC | 450 |
TTCGCATGTC GATTTGGATA CAGAGGGGGA CTAAATTTCC CTCCCATGTC | 500 |
TCACCTCTCG GTTCCAAAGA CAGACGATTT GTCCATAAAC TTGATTTCAA | 550 |
ATCTAGAGGG CAGCATTCAC GACCAAGCCG TAAAAAAAGA TCAACCTGAA | 600 |
GCTGATCCTT GCAAGGATTC TGATATAGAC TTGTCCCTTA AGCTATAG | 650 |
>AT5G01860.1 longest ORF length:215
MELNLSTPTS CSSSSISSSS HEAIPRTKGK TKEEVTAEPS KENQQRLEFR | 50 |
FLFNESSTRN EAKARVFACT FCKKEFSTSQ ALGGHQNAHK QERSLAKRRK | 100 |
EIEINYPELS IYSQYPPSGL SFSSSSSQYD LGVRYNPNIA KTTKPYPFNI | 150 |
FACRFGYRGG LNFPPMSHLS VPKTDDLSIN LISNLEGSIH DQAVKKDQPE | 200 |
ADPCKDSDID LSLKL | 250 |
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