fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G02320 MYB3R-5, ATMYB3R5 ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3R5, myb domain protein 3r-5 (.1.2)

>AT5G02320.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 573
HindIII A|AGCTT 1010
NdeI CA|TATG 1132
PvuII CAG|CTG 1508
SacI GAGCT|C 3
SpeI A|CTAGT 199
StyI C|C[AT][AT]GG 385


Click here to view TAIR data

>AT5G02320.1 length:1647
ATGAGCTCAA GTTCGAATCC ACCGGTTTGT TCACCGGAAA AGGAGGAAAG 
50
AAGTGAAATG AAAATTGAGA TTCAATGTAT GGAGAATAAG CAACCATTAG 
100
CTGCTTCTTG CTCTTCTGCA TCCGAAGGTA GTGGCTGTTT CTTCCTCAAG 
150
TCACCTGAAA TCGCAACTCC TGCCACAGTA TCTTCATTTC CTCGGAGGAC 
200
TAGTGGACCT ATGAGACGAG CAAAAGGTGG TTGGACTCCA GAGGAGGATG 
250
AGACACTTAG ACGAGCAGTT GAAAAGTATA AGGGGAAGAG GTGGAAGAAA 
300
ATAGCGGAAT TTTTCCCAGA GAGAACAGAA GTCCAATGCT TGCACAGGTG 
350
GCAGAAAGTT CTTAATCCAG AGCTTGTTAA AGGACCTTGG ACTCAAGAGG 
400
AGGATGATAA AATCGTTGAA CTTGTAAAAA AATATGGACC TGCCAAATGG 
450
TCTGTCATCG CCAAGTCCTT ACCAGGTCGT ATTGGGAAAC AATGTCGAGA 
500
AAGGTGGCAC AACCATTTAA ATCCTGGTAT TAGAAAGGAT GCTTGGACCG 
550
TAGAAGAAGA ATCAGCTCTC ATGAATTCTC ATCGAATGTA CGGAAACAAA 
600
TGGGCGGAAA TTGCTAAGGT TTTACCAGGA AGGACTGATA ACGCCATAAA 
650
GAACCATTGG AATAGTTCAC TGAAGAAAAA ATTAGAGTTC TACTTAGCAA 
700
CTGGTAACTT GCCACCGCCA GCAAGCAAAT TCATCGTTCT GAAAGATATT 
750
GCTGATGGAG ACAGAGATTC CAAGCAGTCT AGTGCAACTA AACCTTTCAA 
800
GGATTCTGAT TCGCTTACCC AAACCTCTTC AGGAAATACA GATTCAAATG 
850
AAGTTGGAAG AGACCATTTT GACTCTTCTT CCGCTCTGCT TGAAGAAGTA 
900
GCTGCTTCAC GAAGAATCGG TGTCAATGAG TATGCTTGCT CTCCTGTTGA 
950
GTACAAGCCT CAGTTGCCTA ATCTGGAACC AATTTCAGAG GAAGTCAGAA 
1000
TCAACTCAAA AGCTTATTTT GAGAGATCAA TCCAGAGGAA AGTAGAAAAC 
1050
GGGTTTGGAA CTCCAAAGCA TGGGAATTTA TACTATAAGT CTCCACTTGA 
1100
CTATTACTTT CCATCAGAAG CGGATCTGCA ACATATGTAC GGATATGAAT 
1150
GTGGTTGCAG TCCCGGTGCT GCATCACCAG TCAGCTTAAT GACTACACCC 
1200
TGTAATAAAG ACAGTGGTTT AACTGCAACG AGAAGTCCTG AATCTTTCTT 
1250
GAGAGAAGCT GCTAGGACTT TTCCAAACAC ACCTTCTATT TTTAGGAAAA 
1300
GGCGAAAGGT TGTTTTGGCA GCGAAAACAG ATGCTGTTGT TGTTGTTAAT 
1350
GGTGTAGTTA AGGAAGTTGA TCGAAAAGAA GAAAGTAAAG ATATGAGAAA 
1400
AAGTTTGTTG CTGGAGACAA CTGATAATTG CAGTGATGAT GAAGAACTCG 
1450
GGTTAAATGG AAATGCTTTC AATTTGTCTC CACCATATCG GTTAAGAGCT 
1500
AAAAGAACAG CTGTAATCAA ATCAAGACAG CTTGAGTTTA CATCTGAAAA 
1550
GGAGAAGCAG CCAGATAATG AGATTGAGTT TACATCTGCA AAAGAGAAGC 
1600
AGCCTGATAA TGAAATTAAA ACGTCTGAGG AAGACAAGCC TGTGTAG
1650

>AT5G02320.1 longest ORF length:548
MSSSSNPPVC SPEKEERSEM KIEIQCMENK QPLAASCSSA SEGSGCFFLK 
50
SPEIATPATV SSFPRRTSGP MRRAKGGWTP EEDETLRRAV EKYKGKRWKK 
100
IAEFFPERTE VQCLHRWQKV LNPELVKGPW TQEEDDKIVE LVKKYGPAKW 
150
SVIAKSLPGR IGKQCRERWH NHLNPGIRKD AWTVEEESAL MNSHRMYGNK 
200
WAEIAKVLPG RTDNAIKNHW NSSLKKKLEF YLATGNLPPP ASKFIVLKDI 
250
ADGDRDSKQS SATKPFKDSD SLTQTSSGNT DSNEVGRDHF DSSSALLEEV 
300
AASRRIGVNE YACSPVEYKP QLPNLEPISE EVRINSKAYF ERSIQRKVEN 
350
GFGTPKHGNL YYKSPLDYYF PSEADLQHMY GYECGCSPGA ASPVSLMTTP 
400
CNKDSGLTAT RSPESFLREA ARTFPNTPSI FRKRRKVVLA AKTDAVVVVN 
450
GVVKEVDRKE ESKDMRKSLL LETTDNCSDD EELGLNGNAF NLSPPYRLRA 
500
KRTAVIKSRQ LEFTSEKEKQ PDNEIEFTSA KEKQPDNEIK TSEEDKPV
550