fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G02470 DPA Transcription factor DP (.1.2.3)

>AT5G02470.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 859


Click here to view TAIR data

>AT5G02470.3 length:879
ATGAGTATGG AGATGGAGTT GTTTGTCACT CCAGAGAAGC AGAGGCAACA 
50
TCCTTCAGTG AGCGTTGAGA AAACTCCAGT GAGAAGGAAA TTGATTGTTG 
100
ATGATGATTC TGAAATTGGA TCAGAGAAGA AAGGGCAATC AAGAACTTCT 
150
GGAGGCGGGC TTCGTCAATT CAGTGTTATG GTTTGTCAGA AGTTGGAAGC 
200
CAAGAAGATA ACTACTTACA AGGAGGTTGC AGACGAAATT ATTTCAGATT 
250
TTGCCACAAT TAAGCAAAAC GCAGAGAAGC CTTTGAATGA AAATGAGTAC 
300
AATGAGAAGA ACATAAGGCG GAGAGTCTAC GATGCGCTCA ATGTGTTCAT 
350
GGCGTTGGAT ATTATTGCAA GGGATAAAAA GGAAATCCGG TGGAAAGGAC 
400
TTCCTATTAC CTGCAAAAAG GATGTGGAAG AAGTCAAGAT GGATCGTAAT 
450
AAAGTTATGA GCAGTGTGCA AAAGAAGGCT GCTTTTCTTA AAGAGTTGAG 
500
AGAAAAGGTC TCAAGTCTTG AGAGTCTTAT GTCGAGAAAT CAAGAGATGG 
550
TTGTGAAGAC TCAAGGCCCA GCAGAAGGAT TTACCTTACC ATTCATTCTA 
600
CTTGAGACAA ACCCTCACGC AGTAGTCGAA ATCGAGATTT CTGAAGATAT 
650
GCAACTTGTA CACCTCGACT TCAATAGCAC ACCTTTCTCG GTCCATGATG 
700
ATGCTTACAT TTTGAAACTG ATGCAAGAAC AGAAGCAAGA ACAGAACAGA 
750
GTATCTTCTT CTTCATCTAC ACATCACCAA TCTCAACATA GCTCCGCTCA 
800
TTCTTCATCC AGTTCTTGCA TTGCTTCTGG AACCTCAGGC CCGGTTTGCT 
850
GGAACTCGGG ATCCATTGAT ACTCGCTGA
900

>AT5G02470.3 longest ORF length:292
MSMEMELFVT PEKQRQHPSV SVEKTPVRRK LIVDDDSEIG SEKKGQSRTS 
50
GGGLRQFSVM VCQKLEAKKI TTYKEVADEI ISDFATIKQN AEKPLNENEY 
100
NEKNIRRRVY DALNVFMALD IIARDKKEIR WKGLPITCKK DVEEVKMDRN 
150
KVMSSVQKKA AFLKELREKV SSLESLMSRN QEMVVKTQGP AEGFTLPFIL 
200
LETNPHAVVE IEISEDMQLV HLDFNSTPFS VHDDAYILKL MQEQKQEQNR 
250
VSSSSSTHHQ SQHSSAHSSS SSCIASGTSG PVCWNSGSID TR
300