fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G02660 Protein with domains of unknown function (DUF627 and DUF629) (.1)

>AT5G02660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 588, 1840
EcoRI G|AATTC 547
EcoRV GAT|ATC 1227, 1672
HindIII A|AGCTT 1030, 1051
HpaI GTT|AAC 1875
NdeI CA|TATG 742
PstI CTGCA|G 1315
SacI GAGCT|C 1810
StyI C|C[AT][AT]GG 1019
XbaI T|CTAGA 504


Click here to view TAIR data

>AT5G02660.1 length:1890
ATGGAGAAAA AAGAAGAAAA GTTTAGTTCG GTCGCAAGAG GTTTGGGGAA 
50
TTACGTCGAT GCTCTTAAGA TGATAAATGA TTTCTCATCT TCCGCTGAAA 
100
GGGAAGAGAG TGAGGAGTTC GATCATCTTG AAGGTGAAAT ACTTGAGTAT 
150
TTGGGGAAAA AATCAACGAA TCCTGCGTTA AAATTCACTT TCTTGTTGGG 
200
TTCAGTTTCT TCGTTCTCCA AACTTGAACG CTTTCCTCTG TATGCTGCAT 
250
TTTCTCTGTT GAATCTGGTC AGAGAGTACA AATCCGTGGT TTATAACAAG 
300
ATGGCTTCTA TTTACACCCA AAAAGCTCTC CACTTTCTTA AGCCGATAGA 
350
TCGTTTTCTG GCAGAGAGGC TGACATTGGA AACTTTAGAA GCAAGAATTG 
400
ATAAAGGTCC TGTTCCAGAG ATGCCCGTTG GTTCTCCTCT CATTCGTATT 
450
CGGCTGGTTC CGGATACAGA GGATTATGAG AGGCAGAAGT CGTATTGGTT 
500
AGGTCTAGAT GATGAAGGTT CCAATTTCTG GAAGGTTCCA ATTTCTGAAT 
550
TCAAAACCTA TGTGGAGGCC AAAACTGGAG CAGTGAAAGA TCTGGAGATA 
600
GTTCTCAAAT ATGTTAAGAA GAATCTGAAG TGGATAGCCT GGATTTGTAG 
650
AACTTGCTCT AAGAAGTTCT CTACTCGACA AGCATGTCAC GATCATCTGG 
700
AACAAGAACA TGCTACAGGG CTTATACCGT CTCAGAGAAT GCATATGCCT 
750
CAGAGGATAA GTGAGGATTG GGCTGATAAG GTATCATCAG TTAGAGACTG 
800
GAAACCAGTG GATGCAGTAG CTGCTGTTCA AATGATCAAG GATCAGTCTG 
850
CACATGTGAA ATCGTTTGTG TATCAGGATG GGTGGTGCAA TGACTGGCCT 
900
TTAGCTACGG ATCAGGTTAT AGCGCGCAGC CAGTTACTCA AAGAGATCCG 
950
ATCACTCCTT GTAACCTTCA TCCAACATAA GGTTCTCTCA GATAGCTTTC 
1000
GAGAGAGGGT GGTGTATTCC TTGGTTCTAA AGCTTGGCAT TTCAAAACAG 
1050
AAGCTTAAAG ACTGTCGCCT ACTGGAAACA CCTCAGAGTA TCTGTTTTCT 
1100
GGAGTGTGAT GAACTCAACA GAATCCTTGT CTTTCTGCGG AAGATCAAGA 
1150
GTAAAAGGGA TGATGGTACT AATCTTGTTT GCCAAGCAGT GGATGGTTTC 
1200
TTGCAGAGTA GTCTGTTTAG AGGAAAGATA TCCGTTGACT TGCAGTTTTC 
1250
GTTTCTACTT CTGGATAAAC AACTGCTACT AGGGGAGCTT AAGCATTATG 
1300
ATGATGAAGG AAAACTGCAG TTTCTTGTAC CGAGTGATTA CTATGGCAAG 
1350
GTTCGTTCAC GTGGTGATGC TATCTTAACG TGGTTACATG ACAATGTGAA 
1400
TGTTTCACAA GAAGAGGATG GCTTTGTGTT TCCAAAACCC CCTGACGCTA 
1450
ACAACTATGG GATATGGCTG GCTGTACTAC GAGCCATTCA CCTCACCGTT 
1500
AGTCTCTTGG TGGCAAAAAT AGCTCGTAAG AAGCAGTTAG TAGAGGATTC 
1550
CAATGCTTTG CACGAAGCCC AAATTCTTTG TCAACAGAAG AAAAAGGAGA 
1600
AGGATGAAAC GAAGCAGGTT CTTGCAACTC TTCTACCTGA AACATCACCA 
1650
GAATTTTATG TAGCACATAT AGATATCCTA AGTAAGCTGA CGGATGACGA 
1700
CGACATTTTA GCTTCCATTG GTAATCTCTT CTCAGGGGTC CTAGAAGAGG 
1750
TTGCTGAAAC TGACTCTAGT ATCCTCTTGA TTGAAAAGTC AAGGATTGCT 
1800
CTACTTGGTG AGCTCAACCA ACTAGCGTTT TTTGACTACA GATCTTATGT 
1850
TGCTAGACAC CTCAAAAAGT TTCTGTTAAC CAAGCTCTGA 
1900

>AT5G02660.1 longest ORF length:629
MEKKEEKFSS VARGLGNYVD ALKMINDFSS SAEREESEEF DHLEGEILEY 
50
LGKKSTNPAL KFTFLLGSVS SFSKLERFPL YAAFSLLNLV REYKSVVYNK 
100
MASIYTQKAL HFLKPIDRFL AERLTLETLE ARIDKGPVPE MPVGSPLIRI 
150
RLVPDTEDYE RQKSYWLGLD DEGSNFWKVP ISEFKTYVEA KTGAVKDLEI 
200
VLKYVKKNLK WIAWICRTCS KKFSTRQACH DHLEQEHATG LIPSQRMHMP 
250
QRISEDWADK VSSVRDWKPV DAVAAVQMIK DQSAHVKSFV YQDGWCNDWP 
300
LATDQVIARS QLLKEIRSLL VTFIQHKVLS DSFRERVVYS LVLKLGISKQ 
350
KLKDCRLLET PQSICFLECD ELNRILVFLR KIKSKRDDGT NLVCQAVDGF 
400
LQSSLFRGKI SVDLQFSFLL LDKQLLLGEL KHYDDEGKLQ FLVPSDYYGK 
450
VRSRGDAILT WLHDNVNVSQ EEDGFVFPKP PDANNYGIWL AVLRAIHLTV 
500
SLLVAKIARK KQLVEDSNAL HEAQILCQQK KKEKDETKQV LATLLPETSP 
550
EFYVAHIDIL SKLTDDDDIL ASIGNLFSGV LEEVAETDSS ILLIEKSRIA 
600
LLGELNQLAF FDYRSYVARH LKKFLLTKL
650