Locus |
Common name |
Short description |
AT5G04150 |
bHLH101 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT5G04150.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
10 |
NdeI
| CA|TATG |
112 |
PstI
| CTGCA|G |
16 |
PvuII
| CAG|CTG |
427 |
SacI
| GAGCT|C |
388 |
StyI
| C|C[AT][AT]GG |
10 |
XhoI
| C|TCGAG |
405 |
Click here to view TAIR data
>AT5G04150.1 length:723
ATGGAGTATC CATGGCTGCA GTCTCAAGTT CATTCCTTTT CACCTACTCT | 50 |
CCATTTTCCT TCCTTCCTTC ATCCTTTAGA TGATTCCAAG AGCCATAACA | 100 |
TCAATCTTCA TCATATGAGT CTTAGTCACA GCAATAATAC TAACAGTAAC | 150 |
AATAACAATT ATCAAGAAGA AGATCGAGGA GCGGTGGTTT TGGAGAAGAA | 200 |
ACTGAATCAC AACGCAAGCG AACGAGACCG CCGTAGAAAA CTTAACGCCT | 250 |
TGTACTCTTC ACTTCGTGCT CTCTTGCCTC TTTCTGATCA AAAGAGGAAG | 300 |
CTGAGCATTC CTATGACGGT AGCGAGAGTA GTGAAATACA TACCAGAGCA | 350 |
GAAGCAAGAA CTTCAACGTT TGTCTCGGAG AAAAGAAGAG CTCTTGAAGA | 400 |
GGATCTCGAG AAAAACTCAC CAAGAGCAGC TGAGAAACAA AGCAATGATG | 450 |
GACTCAATAG ATTCTTCTTC CTCTCAACGG ATCGCAGCAA ATTGGCTCAC | 500 |
TGACACAGAG ATTGCTGTCC AGATTGCTAC GTCGAAATGG ACATCTGTTT | 550 |
CAGACATGTT GCTTAGGTTA GAAGAAAACG GGCTTAATGT CATAAGCGTC | 600 |
TCTTCTTCCG TTTCTTCCAC CGCAAGGATC TTCTACACTC TACATCTTCA | 650 |
GATGAGAGGA GATTGCAAAG TGAGACTGGA GGAACTCATC AATGGTATGC | 700 |
TCTTGGGATT ACGCCAATCA TAA | 750 |
>AT5G04150.1 longest ORF length:240
MEYPWLQSQV HSFSPTLHFP SFLHPLDDSK SHNINLHHMS LSHSNNTNSN | 50 |
NNNYQEEDRG AVVLEKKLNH NASERDRRRK LNALYSSLRA LLPLSDQKRK | 100 |
LSIPMTVARV VKYIPEQKQE LQRLSRRKEE LLKRISRKTH QEQLRNKAMM | 150 |
DSIDSSSSQR IAANWLTDTE IAVQIATSKW TSVSDMLLRL EENGLNVISV | 200 |
SSSVSSTARI FYTLHLQMRG DCKVRLEELI NGMLLGLRQS | 250 |
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