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| Locus | Common name | Short description |
| AT5G04340 | ZAT6, CZF2, C2H2 | COLD INDUCED ZINC FINGER PROTEIN 2, zinc finger of Arabidopsis thaliana 6 (.1) |
>AT5G04340.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstZ17I, Bsu36I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MseI, MslI, MspA1I, , NarI, NcoI, NdeI, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TseI, XbaI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 378, 570 |
| AccII(FnuDII) | CG|CG | 179 |
| AciI | C|CGC | 617 |
| AgeI | A|CCGGT | 475 |
| AluI | AG|CT | 338, 372, 481 |
| ApoI | Pu|AATTPy | 118, 552, 631 |
| BalI | TGG|CCA | 591 |
| BanI | G|GPyPuCC | 503 |
| BfaI | C|TAG | 68 |
| BglII | A|GATCT | 112 |
| BsaBI | GATNN|NNATC | 111 |
| BsaJI | C|CNNGG | 597 |
| BsaWI | [AT]|CCGG[AT] | 332, 412, 475, 627, 689 |
| BsiEI | CGPuPy|CG | 123 |
| BslI | CCNNNNN|NNGG | 418 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 503 |
| BsrFI | Pu|CCGGPy | 475, 675 |
| BssKI | |CCNGG | 302, 701 |
| BstF5I | GGATGNN| | 145 |
| BstNI | CC|[AT]GG | 302 |
| BstUI | CG|CG | 179 |
| BstXI | CCANNNNN|NTGG | 309 |
| BstYI | Pu|GATCPy | 112 |
| BtgI | C|CPuPyGG | 597 |
| BtrI | CAC|GTC | 399, 580 |
| BtsI | GCAGTGNN| | 589 |
| Cac8I | GCN|NGC | 178, 675 |
| Cfr10I | [AG]|CCGG[TC] | 475, 675 |
| DdeI | C|TNAG | 100 |
| DpnI | GA-CH3|TC | 96, 105, 111, 259 |
| DpnII | |GATC | 96, 105, 111, 259 |
| EaeI | Py|GGCCPu | 492, 591 |
| EcoRI | G|AATTC | 118, 552, 631 |
| Fnu4HI | GC|NGC | 490 |
| HaeIII | GG|CC | 491, 590 |
| HincII | GTPy|PuAC | 378, 643 |
| HindIII | A|AGCTT | 339 |
| HinfI | G|ANTC | 47, 60, 131, 665 |
| HpaII | C|CGG | 331, 360, 411, 474, 626, 674, 688, 701 |
| Hpy188I | TCN|GA | 38, 114, 128, 257, 555 |
| Hpy99I | CG[AT]CG| | 182, 385 |
| HpyCH4III | ACN|GT | 124, 196, 500, 595 |
| HpyCH4IV | A|CGT | 398, 441, 579 |
| MboI | |GATC | 96, 105, 111, 259 |
| MscI | TGG|CCA | 591 |
| MspI | C|CGG | 331, 360, 411, 474, 626, 674, 688, 701 |
| MwoI | GCNNNNN|NNGC | 583 |
| N.BstNBI | GAGTCNNNN|N | 136, 670 |
| NaeI | GCC|GGC | 675 |
| NciI | CC|[CG]GG | 701 |
| NgoMIV | G|CCGGC | 675 |
| NlaIII | CATG| | 77, 166 |
| NlaIV | GGN|NCC | 503 |
| NruI | TCG|CGA | 180 |
| PflFI | GACN|NNGTC | 384 |
| PspGI | |CC[AT]GG | 302 |
| SalI | G|TCGAC | 378 |
| Sau3AI | |GATC | 96, 105, 111, 259 |
| ScrFI | CC|NGG | 302, 701 |
| Taqƒ¿I | T|CGA | 120, 377, 548, 635 |
| TfiI | G|A[AT]TC | 60 |
| Tsp45I | |GT[CG]AC | 199, 280, 328 |
| Tsp509I | |AATT | 117, 551, 630 |
| TspRI | NNCA[CG]TGNN| | 589 |
| Tth111I | GACN|NNGTC | 384 |
| XcmI | CCANNNNN|NNNNTGG | 312, 588 |
Click here to view TAIR data
>AT5G04340.1 length:717
ATGGCACTTG AAACTCTTAC TTCTCCAAGA TTATCTTCTC CGATGCCGAC | 50 |
TCTGTTTCAA GATTCAGCAC TAGGGTTTCA TGGAAGCAAA GGCAAACGAT | 100 |
CTAAGCGATC AAGATCTGAA TTCGACCGTC AGAGTCTCAC GGAGGATGAA | 150 |
TATATCGCTT TATGTCTCAT GCTTCTTGCT CGCGACGGAG ATAGAAACCG | 200 |
TGACCTTGAC CTGCCTTCTT CTTCGTCTTC ACCTCCTCTG CTTCCTCCTC | 250 |
TTCCTACTCC GATCTACAAG TGTAGCGTCT GTGACAAGGC GTTTTCGTCT | 300 |
TACCAGGCTC TTGGTGGACA CAAGGCAAGT CACCGGAAAA GCTTTTCGCT | 350 |
TACTCAATCT GCCGGAGGAG ATGAGCTGTC GACATCGTCG GCGATAACCA | 400 |
CGTCTGGTAT ATCCGGTGGC GGGGGAGGAA GTGTGAAGTC GCACGTTTGC | 450 |
TCTATCTGTC ATAAATCGTT CGCCACCGGT CAAGCTCTCG GCGGCCACAA | 500 |
ACGGTGCCAC TACGAAGGAA AGAACGGAGG CGGTGTGAGT AGTAGCGTGT | 550 |
CGAATTCTGA AGATGTGGGG TCTACAAGCC ACGTCAGCAG TGGCCACCGT | 600 |
GGGTTTGACC TCAACATACC GCCGATACCG GAATTCTCGA TGGTCAACGG | 650 |
AGACGAAGAG GTGATGAGTC CTATGCCGGC GAAGAAACTC CGGTTTGACT | 700 |
TCCCGGAGAA ACCCTAA | 750 |
>AT5G04340.1 longest ORF length:238
MALETLTSPR LSSPMPTLFQ DSALGFHGSK GKRSKRSRSE FDRQSLTEDE | 50 |
YIALCLMLLA RDGDRNRDLD LPSSSSSPPL LPPLPTPIYK CSVCDKAFSS | 100 |
YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC | 150 |
SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR | 200 |
GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP | 250 |