Locus |
Common name |
Short description |
AT5G04340 |
ZAT6, CZF2, C2H2 |
COLD INDUCED ZINC FINGER PROTEIN 2, zinc finger of Arabidopsis thaliana 6 (.1) |
>AT5G04340.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
112 |
EcoRI
| G|AATTC |
118, 552, 631 |
HindIII
| A|AGCTT |
339 |
SalI
| G|TCGAC |
378 |
Click here to view TAIR data
>AT5G04340.1 length:717
ATGGCACTTG AAACTCTTAC TTCTCCAAGA TTATCTTCTC CGATGCCGAC | 50 |
TCTGTTTCAA GATTCAGCAC TAGGGTTTCA TGGAAGCAAA GGCAAACGAT | 100 |
CTAAGCGATC AAGATCTGAA TTCGACCGTC AGAGTCTCAC GGAGGATGAA | 150 |
TATATCGCTT TATGTCTCAT GCTTCTTGCT CGCGACGGAG ATAGAAACCG | 200 |
TGACCTTGAC CTGCCTTCTT CTTCGTCTTC ACCTCCTCTG CTTCCTCCTC | 250 |
TTCCTACTCC GATCTACAAG TGTAGCGTCT GTGACAAGGC GTTTTCGTCT | 300 |
TACCAGGCTC TTGGTGGACA CAAGGCAAGT CACCGGAAAA GCTTTTCGCT | 350 |
TACTCAATCT GCCGGAGGAG ATGAGCTGTC GACATCGTCG GCGATAACCA | 400 |
CGTCTGGTAT ATCCGGTGGC GGGGGAGGAA GTGTGAAGTC GCACGTTTGC | 450 |
TCTATCTGTC ATAAATCGTT CGCCACCGGT CAAGCTCTCG GCGGCCACAA | 500 |
ACGGTGCCAC TACGAAGGAA AGAACGGAGG CGGTGTGAGT AGTAGCGTGT | 550 |
CGAATTCTGA AGATGTGGGG TCTACAAGCC ACGTCAGCAG TGGCCACCGT | 600 |
GGGTTTGACC TCAACATACC GCCGATACCG GAATTCTCGA TGGTCAACGG | 650 |
AGACGAAGAG GTGATGAGTC CTATGCCGGC GAAGAAACTC CGGTTTGACT | 700 |
TCCCGGAGAA ACCCTAA | 750 |
>AT5G04340.1 longest ORF length:238
MALETLTSPR LSSPMPTLFQ DSALGFHGSK GKRSKRSRSE FDRQSLTEDE | 50 |
YIALCLMLLA RDGDRNRDLD LPSSSSSPPL LPPLPTPIYK CSVCDKAFSS | 100 |
YQALGGHKAS HRKSFSLTQS AGGDELSTSS AITTSGISGG GGGSVKSHVC | 150 |
SICHKSFATG QALGGHKRCH YEGKNGGGVS SSVSNSEDVG STSHVSSGHR | 200 |
GFDLNIPPIP EFSMVNGDEE VMSPMPAKKL RFDFPEKP | 250 |
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