fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G04820 ATOFP13, OFP13 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13, ovate family protein 13 (.1)

>AT5G04820.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 465


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>AT5G04820.1 length:783
ATGGGGAAGA AGAAGATGAA ACTCTCTTCT CTGTTCAAAG GCGGAGCCGG 
50
AGGATTACTA GCGGTTCCTC TCTGTTACAA TGCCAAAACT CTTTCGTTCC 
100
GAGTCGGCGA CGACATGATC AAGACGGTGA ACTCTGTTTT CTTCGACCAC 
150
CACCACAACA ACAACAATGG AGGAGATTTG TTGGAAGCGG AGACGCCTGA 
200
GTCATGGTTT ACTAACTCGT CCGAGACAGC GAGTCACTCA ACCGAGTCGG 
250
ATCAAGACCT TGACGCTGAG TCCTTAGAGA TGGTGGTTCG TGGCGTTGTT 
300
AGATCGGAGC GGTTATTCTT CGATCCAGGA GTTACGAGTT CGATTCTGGA 
350
AGAGATTGAA GAGAAATCGA AATCGGATTT GAAATCGAAG GAAACGGTTG 
400
CGGTGGGAGA AGATCGGAGT ACGCCGATTG AGGAGATTAG TGTCGCGGTG 
450
GCGATGGAAT CCGAGGATCC GTACGGTGAT TTCCGGCGAT CGATGGAGGA 
500
GATGGTGACG AGTCACGGTG AGTTGGCTAA AGATTGGGAG AGCTTGGAAT 
550
CGATGCTCGC TTGGTATTTG AGGATGAATG GGAGGAAGAG TCACGGCGTT 
600
ATCGTCAGTG CTTTTGTTGA TCTTCTCTCT GGACTCTCTG ATTCCGGCGC 
650
CGGAATAACG TCGGCTTCGG TATCGGATTC GGCTCGTTAT TCAACCGCCG 
700
TTTCGTCTTT GCCGTCGTCG CCGGTTTATT CGTTATCTCA AGGTCAGACG 
750
GAGATTCAAG AGGAAGAGAG ACGGAGCTGT TAA
800

>AT5G04820.1 longest ORF length:260
MGKKKMKLSS LFKGGAGGLL AVPLCYNAKT LSFRVGDDMI KTVNSVFFDH 
50
HHNNNNGGDL LEAETPESWF TNSSETASHS TESDQDLDAE SLEMVVRGVV 
100
RSERLFFDPG VTSSILEEIE EKSKSDLKSK ETVAVGEDRS TPIEEISVAV 
150
AMESEDPYGD FRRSMEEMVT SHGELAKDWE SLESMLAWYL RMNGRKSHGV 
200
IVSAFVDLLS GLSDSGAGIT SASVSDSARY STAVSSLPSS PVYSLSQGQT 
250
EIQEEERRSC 
300