Locus |
Common name |
Short description |
AT5G05090 |
|
Homeodomain-like superfamily protein (.1) |
>AT5G05090.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
NheI
| G|CTAGC |
376 |
SacI
| GAGCT|C |
513 |
XhoI
| C|TCGAG |
788 |
Click here to view TAIR data
>AT5G05090.1 length:801
ATGAGAGAAG AAGATTCCAA TTGGTTTGCT AAATGGGAAG AAGAGCTTCC | 50 |
GTCGCCGGAG GAACTCATAC CTTTATCTCA ATCTTTAATC ACGCCTGATC | 100 |
TCGCCATCGC CTTCGATCTC CACCGTAACA ACAACTCAAA CTCCGGTCAA | 150 |
CCTCTACCTC AAACCACACC GCCACAACCC AATTCCTCAG CCGAAATCGC | 200 |
CGGAGACTCT ACCGGAGACG AACCAGCAAG AACGCTAAAA CGACCGCGTT | 250 |
TAGTATGGAC GCCACAGCTA CACAAACGTT TCGTAGACGC GGTGGCTCAT | 300 |
CTCGGGATAA AAAACGCGGT TCCTAAAACC ATCATGCAGC TTATGAGCGT | 350 |
TGATGGTTTA ACAAGAGAAA ACGTCGCTAG CCATTTGCAA AAATACAGAC | 400 |
TTTACCTCAA AAGAATGAAA TCCGGCGGCG GAGGAGGCGG CAGCGGTGAT | 450 |
TCCGATCATC TCTTTGCCAG CTCACCTGTT CCTCCACATT TCCTCCATCC | 500 |
GACAAGTAGA CAGAGCTCCG ACCTTTTCAT ACCCTCTTTT GTCCCAATTT | 550 |
CAACTCAGCA GCAACATATC GCAGCACCAC CGTCTCAGTT CCTCCACCGA | 600 |
CAAATCTCCG CCGTTAATTT CACTTCACCG ACCAAAGCGA CCGACCAAGC | 650 |
AATGTTCTTG GCTAGGCAGC AGAGTGAACT ACAGCAACCA GTTTTCAAAC | 700 |
CATCTTCATT GCATTTACAT AGTCAAGTCG CTAATTACAC GCAAGATTTG | 750 |
AAATCAGGAG CCAAAACGGT CTTGACTCTG TTTCCAACTC GAGACGATTG | 800 |
A | 850 |
>AT5G05090.1 longest ORF length:266
MREEDSNWFA KWEEELPSPE ELIPLSQSLI TPDLAIAFDL HRNNNSNSGQ | 50 |
PLPQTTPPQP NSSAEIAGDS TGDEPARTLK RPRLVWTPQL HKRFVDAVAH | 100 |
LGIKNAVPKT IMQLMSVDGL TRENVASHLQ KYRLYLKRMK SGGGGGGSGD | 150 |
SDHLFASSPV PPHFLHPTSR QSSDLFIPSF VPISTQQQHI AAPPSQFLHR | 200 |
QISAVNFTSP TKATDQAMFL ARQQSELQQP VFKPSSLHLH SQVANYTQDL | 250 |
KSGAKTVLTL FPTRDD | 300 |
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