Locus |
Common name |
Short description |
AT5G05120 |
|
C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT5G05120.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
346, 422 |
BglII
| A|GATCT |
213 |
NcoI
| C|CATGG |
323 |
StyI
| C|C[AT][AT]GG |
97, 323, 486 |
Click here to view TAIR data
>AT5G05120.1 length:606
ATGTTGTCCT CGGACTCGAA TTACGCTAGT GATATTAGCG ACGATGCCTC | 50 |
CGCCACCGGA TCGATAGAGA ATCCTATATA CAAATGCAAG TATTGTCCTA | 100 |
GGAAGTTCGA TAAAACACAA GCATTAGGTG GTCATCAAAA TGCACACAGA | 150 |
AAGGAGAGAG AGGTCGAAAA ACAACAAAAA GCATTTTTGG CGCATTTGAA | 200 |
CCGACCAGAA CCAGATCTTT ACGCGTACTC GTATTCGTAT CATCATTCAT | 250 |
TTCCTAACCA ATACGCACTC CCACCGGGAT TTGAACAGCC TCAGTACAAA | 300 |
GTTGATAGAT CATACAAGAT GTCCATGGTC TACAACCAAT ATGTGGGATC | 350 |
CTCAAGCTCT AGCTTTGCAG GACTACAAAG TGACCCAAGT CAAGGAATGA | 400 |
ACCAGGATTG GACCTTTACC GGGATCCCAT TCCTACCCCA ATCTCAACCT | 450 |
CAACCACTAT CGTCACCAAT ATGTTTGGAT CTTTGCCTTG GCATTGGTAG | 500 |
CTCCCAAACC CAACCACAAC CTCAAGAACC AAATGATGCA ACAGAAGAGA | 550 |
TGGATGCTGA GAAAGAAAAT GATGGTTCTT CCCTTTCTCT CTCACTCAAA | 600 |
CTGTGA | 650 |
>AT5G05120.1 longest ORF length:201
MLSSDSNYAS DISDDASATG SIENPIYKCK YCPRKFDKTQ ALGGHQNAHR | 50 |
KEREVEKQQK AFLAHLNRPE PDLYAYSYSY HHSFPNQYAL PPGFEQPQYK | 100 |
VDRSYKMSMV YNQYVGSSSS SFAGLQSDPS QGMNQDWTFT GIPFLPQSQP | 150 |
QPLSSPICLD LCLGIGSSQT QPQPQEPNDA TEEMDAEKEN DGSSLSLSLK | 200 |
L | 250 |
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