fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G05410 DREB2A DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DRE-binding protein 2A (.1.2)

>AT5G05410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, StyI
Name Recognition sequence Cut positions
BamHI G|GATCC 495
KpnI GGTAC|C 842
SmaI CCC|GGG 846
XbaI T|CTAGA 67
XhoI C|TCGAG 946


Click here to view TAIR data

>AT5G05410.1 length:1008
ATGGCAGTTT ATGATCAGAG TGGAGATAGA AACAGAACAC AAATTGATAC 
50
ATCGAGGAAA AGGAAATCTA GAAGTAGAGG TGACGGTACT ACTGTGGCTG 
100
AGAGATTAAA GAGATGGAAA GAGTATAACG AGACCGTAGA AGAAGTTTCT 
150
ACCAAGAAGA GGAAAGTACC TGCGAAAGGG TCGAAGAAGG GTTGTATGAA 
200
AGGTAAAGGA GGACCAGAGA ATAGCCGATG TAGTTTCAGA GGAGTTAGGC 
250
AAAGGATTTG GGGTAAATGG GTTGCTGAGA TCAGAGAGCC TAATCGAGGT 
300
AGCAGGCTTT GGCTTGGTAC TTTCCCTACT GCTCAAGAAG CTGCTTCTGC 
350
TTATGATGAG GCTGCTAAAG CTATGTATGG TCCTTTGGCT CGTCTTAATT 
400
TCCCTCGGTC TGATGCGTCT GAGGTTACGA GTACCTCAAG TCAGTCTGAG 
450
GTGTGTACTG TTGAGACTCC TGGTTGTGTT CATGTGAAAA CAGAGGATCC 
500
AGATTGTGAA TCTAAACCCT TCTCCGGTGG AGTGGAGCCG ATGTATTGTC 
550
TGGAGAATGG TGCGGAAGAG ATGAAGAGAG GTGTTAAAGC GGATAAGCAT 
600
TGGCTGAGCG AGTTTGAACA TAACTATTGG AGTGATATTC TGAAAGAGAA 
650
AGAGAAACAG AAGGAGCAAG GGATTGTAGA AACCTGTCAG CAACAACAGC 
700
AGGATTCGCT ATCTGTTGCA GACTATGGTT GGCCCAATGA TGTGGATCAG 
750
AGTCACTTGG ATTCTTCAGA CATGTTTGAT GTCGATGAGC TTCTACGTGA 
800
CCTAAATGGC GACGATGTGT TTGCAGGCTT AAATCAGGAC CGGTACCCGG 
850
GGAACAGTGT TGCCAACGGT TCATACAGGC CCGAGAGTCA ACAAAGTGGT 
900
TTTGATCCGC TACAAAGCCT CAACTACGGA ATACCTCCGT TTCAGCTCGA 
950
GGGAAAGGAT GGTAATGGAT TCTTCGACGA CTTGAGTTAC TTGGATCTGG 
1000
AGAACTAA
1050

>AT5G05410.1 longest ORF length:335
MAVYDQSGDR NRTQIDTSRK RKSRSRGDGT TVAERLKRWK EYNETVEEVS 
50
TKKRKVPAKG SKKGCMKGKG GPENSRCSFR GVRQRIWGKW VAEIREPNRG 
100
SRLWLGTFPT AQEAASAYDE AAKAMYGPLA RLNFPRSDAS EVTSTSSQSE 
150
VCTVETPGCV HVKTEDPDCE SKPFSGGVEP MYCLENGAEE MKRGVKADKH 
200
WLSEFEHNYW SDILKEKEKQ KEQGIVETCQ QQQQDSLSVA DYGWPNDVDQ 
250
SHLDSSDMFD VDELLRDLNG DDVFAGLNQD RYPGNSVANG SYRPESQQSG 
300
FDPLQSLNYG IPPFQLEGKD GNGFFDDLSY LDLEN
350