|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G05410 | DREB2A | DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DRE-binding protein 2A (.1.2) |
>AT5G05410.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, StyI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 495 |
| KpnI | GGTAC|C | 743 |
| SmaI | CCC|GGG | 747 |
| XbaI | T|CTAGA | 67 |
| XhoI | C|TCGAG | 847 |
Click here to view TAIR data
>AT5G05410.2 length:909
ATGGCAGTTT ATGATCAGAG TGGAGATAGA AACAGAACAC AAATTGATAC | 50 |
ATCGAGGAAA AGGAAATCTA GAAGTAGAGG TGACGGTACT ACTGTGGCTG | 100 |
AGAGATTAAA GAGATGGAAA GAGTATAACG AGACCGTAGA AGAAGTTTCT | 150 |
ACCAAGAAGA GGAAAGTACC TGCGAAAGGG TCGAAGAAGG GTTGTATGAA | 200 |
AGGTAAAGGA GGACCAGAGA ATAGCCGATG TAGTTTCAGA GGAGTTAGGC | 250 |
AAAGGATTTG GGGTAAATGG GTTGCTGAGA TCAGAGAGCC TAATCGAGGT | 300 |
AGCAGGCTTT GGCTTGGTAC TTTCCCTACT GCTCAAGAAG CTGCTTCTGC | 350 |
TTATGATGAG GCTGCTAAAG CTATGTATGG TCCTTTGGCT CGTCTTAATT | 400 |
TCCCTCGGTC TGATGCGTCT GAGGTTACGA GTACCTCAAG TCAGTCTGAG | 450 |
GTGTGTACTG TTGAGACTCC TGGTTGTGTT CATGTGAAAA CAGAGGATCC | 500 |
AGATTGTGAA TCTAAACCCT TCTCCGGTGG AGTGGAGCCG ATGTATTGTC | 550 |
TGGAGAATGG TGCGGAAGAG ATGAAGAGAG GTGTTAAAGC GGATAAGCAT | 600 |
TGGCTGAGCG AGTTTGAACA TAACTATTGG AGTGATATTC TGAAAGAGAA | 650 |
AGAGAAACAG AAGGAGCAAG GGATTGTAGA AACCTGTCAG CAACAACAGC | 700 |
AGGATTCGCT ATCTGTTGCA GACTATGGCT TAAATCAGGA CCGGTACCCG | 750 |
GGGAACAGTG TTGCCAACGG TTCATACAGG CCCGAGAGTC AACAAAGTGG | 800 |
TTTTGATCCG CTACAAAGCC TCAACTACGG AATACCTCCG TTTCAGCTCG | 850 |
AGGGAAAGGA TGGTAATGGA TTCTTCGACG ACTTGAGTTA CTTGGATCTG | 900 |
GAGAACTAA | 950 |
>AT5G05410.2 longest ORF length:302
MAVYDQSGDR NRTQIDTSRK RKSRSRGDGT TVAERLKRWK EYNETVEEVS | 50 |
TKKRKVPAKG SKKGCMKGKG GPENSRCSFR GVRQRIWGKW VAEIREPNRG | 100 |
SRLWLGTFPT AQEAASAYDE AAKAMYGPLA RLNFPRSDAS EVTSTSSQSE | 150 |
VCTVETPGCV HVKTEDPDCE SKPFSGGVEP MYCLENGAEE MKRGVKADKH | 200 |
WLSEFEHNYW SDILKEKEKQ KEQGIVETCQ QQQQDSLSVA DYGLNQDRYP | 250 |
GNSVANGSYR PESQQSGFDP LQSLNYGIPP FQLEGKDGNG FFDDLSYLDL | 300 |
EN | 350 |