| Locus |
Common name |
Short description |
| AT5G05770 |
WOX5A, WOX7 |
WUSCHEL related homeobox 5A, WUSCHEL related homeobox 7 (.1) |
>AT5G05770.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIII, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, TseI, Tsp45I, Tsp509I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AflIII
| A|CPuPyGT |
218 |
| AluI
| AG|CT |
25, 111, 183, 244 |
| AvaII
| G|G[AT]CC |
158 |
| BclI
| T|GATCA |
291 |
| BfaI
| C|TAG |
27, 246 |
| BglII
| A|GATCT |
123, 173, 309 |
| BsaBI
| GATNN|NNATC |
308 |
| BsiHKAI
| G[AT]GC[AT]|C |
153 |
| BsiWI
| C|GTACG |
336 |
| BslI
| CCNNNNN|NNGG |
360 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
153 |
| BstYI
| Pu|GATCPy |
123, 173, 309 |
| DdeI
| C|TNAG |
186, 316 |
| DpnI
| GA-CH3|TC |
122, 172, 290, 308 |
| DpnII
| |GATC |
122, 172, 290, 308 |
| HindIII
| A|AGCTT |
112 |
| HinfI
| G|ANTC |
13, 89, 164 |
| HpaII
| C|CGG |
265 |
| Hpy188I
| TCN|GA |
116, 167 |
| Hpy99I
| CG[AT]CG| |
4, 339 |
| HpyCH4III
| ACN|GT |
83, 96, 196, 279 |
| HpyCH4IV
| A|CGT |
216, 333, 337 |
| MboI
| |GATC |
122, 172, 290, 308 |
| MseI
| T|TAA |
21, 364 |
| MspI
| C|CGG |
265 |
| MwoI
| GCNNNNN|NNGC |
110 |
| NlaIV
| GGN|NCC |
230 |
| RsaI
| GT|AC |
335 |
| Sau3AI
| |GATC |
122, 172, 290, 308 |
| Sau96I
| G|GNCC |
158 |
| Taqƒ¿I
| T|CGA |
5 |
| TfiI
| G|A[AT]TC |
13, 89, 164 |
| XmnI
| GAANN|NNTTC |
220 |
Click here to view TAIR data
>AT5G05770.1 length:369
ATGTCGTCGA GAGGATTCAA CATTAAAGCT AGAGGATTAT GTAATAACAA | 50 |
CAACGGAGGA GGAGGAACGG GGGCGAAGTG TGGACGGTGG AATCCAACGG | 100 |
TGGAGCAAGT GAAGCTTCTG ACAGATCTGT TCAAGGCGGG ACTGCGAACA | 150 |
CCGAGCACGG ACCAGATTCA GAAGATCTCT ATGGAGCTGA GTTTCTACGG | 200 |
TAAGATTGAG AGCAAGAACG TGTTCTATTG GTTCCAAAAC CATAAAGCTA | 250 |
GAGAGAGACA AAAGTGCCGG AAAATCTCCA CCGTCAAGTT TGATCATCGT | 300 |
CAAGATACAG ATCTTTCTAA GCCTCGCCGA GACAACGTAC GTCGTCATCA | 350 |
ACTACCAGCG AAAGGTTAA | 400 |
>AT5G05770.1 longest ORF length:122
MSSRGFNIKA RGLCNNNNGG GGTGAKCGRW NPTVEQVKLL TDLFKAGLRT | 50 |
PSTDQIQKIS MELSFYGKIE SKNVFYWFQN HKARERQKCR KISTVKFDHR | 100 |
QDTDLSKPRR DNVRRHQLPA KG | 150 |
|