fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G05770 WOX5A, WOX7 WUSCHEL related homeobox 5A, WUSCHEL related homeobox 7 (.1)

>AT5G05770.1 genomic map

>>Show CDS map




Uncut enzymes: AatII, Acc65I, AciI, AfeI, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaLI, AscI, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsmAI, BsmBI, BsmFI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstZ17I, Bsu36I, BtrI, BtsI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, NaeI, , NarI, NgoMIV, NheI, NotI, PI-PspI, PI-SceI(VDE), PaeR7I, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PstI, PvuII, RsrII, SacI, SacII, SapI, SbfI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, StuI, TliI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 1424, 5456
AccII(FnuDII) CG|CG 1408, 5469
AccIII(BspMII) T|CCGGA 95, 5341, 5724
AclI AA|CGTT 2341, 2755, 4552
AflII C|TTAAG 679, 1218
AflIII A|CPuPyGT 3484, 4217, 4624
AluI AG|CT 23, 380, 473, 1394, 1403, 2109, 2550, 3360, 3392, 3493, 3616, 4024, 4110, 4182, 4243, 4667, 4759, 4830, 5281, 5520, 5550
AlwNI CAGNNN|CTG 5614
ApaI GGGCC|C 1026
ApoI Pu|AATTPy 276, 457, 566, 588, 719, 759, 791, 799, 1106, 1763, 2221, 2273, 2458, 2536, 2567, 2713, 2977, 3098, 3375, 3434, 3500, 3656, 4775, 5114
AseI AT|TAAT 1008, 1268, 1746, 2145, 3109, 3276, 3993
AvaI C|PyCGPuG 3649
AvaII G|G[AT]CC 957, 3902, 4157
AvrII C|CTAGG 2040
BamHI G|GATCC 282, 5598
BanII GPuGCPy|C 409, 1026, 5799
BclI T|GATCA 2019, 3472, 4290, 4740, 5159
BfaI C|TAG 2039, 2082, 2156, 2552, 2981, 3491, 3614, 3622, 3754, 4026, 4245, 4380, 4704, 4757, 4761, 5436, 5585, 5669, 5739, 5777
BglII A|GATCT 185, 4122, 4172, 4308, 4372, 4755, 5605
BlpI GC|TNAGC 2862
BsaAI PyAC|GTPu 1499, 2912, 3067
BsaBI GATNN|NNATC 4307
BsaJI C|CNNGG 1610, 2040, 3899, 5663
BsaWI [AT]|CCGG[AT] 95, 5341, 5724
BsiEI CGPuPy|CG 294, 5412
BsiHKAI G[AT]GC[AT]|C 4152
BsiWI C|GTACG 3461, 4335
BslI CCNNNNN|NNGG 257, 417, 4359, 5202
BsmI GAATGCN| 1817
BsoBI C|PyCGPuG 3649
Bsp1286I G[GAT]GC[CAT]|C 409, 1026, 4152, 5799
BspDI AT|CGAT 1640
BspEI T|CCGGA 95, 5341, 5724
BspHI T|CATGA 3389
BsrFI Pu|CCGGPy 443
BsrI ACTGGN| 194, 3089
BssKI |CCNGG 257, 285, 5259, 5662
BssSI C|TCGTG 217, 2870, 5526
BstF5I GGATGNN| 304, 1352, 2637, 4928, 5378
BstNI CC|[AT]GG 5259, 5662
BstUI CG|CG 1408, 5469
BstXI CCANNNNN|NTGG 5174
BstYI Pu|GATCPy 185, 282, 1382, 2846, 4122, 4172, 4308, 4372, 4656, 4755, 5598, 5605
BtgI C|CPuPyGG 1610
Cac8I GCN|NGC 211, 1437, 3689, 4564, 4590, 5490, 5861
Cfr10I [AG]|CCGG[TC] 443
ClaI AT|CGAT 1640
DdeI C|TNAG 463, 521, 1260, 1687, 2861, 3971, 4185, 4315, 4430, 4633, 4720, 5446, 5477, 5608
DpnI GA-CH3|TC 97, 184, 196, 220, 253, 281, 312, 349, 393, 1163, 1354, 1381, 2018, 2686, 2845, 3471, 3639, 4121, 4171, 4289, 4307, 4371, 4655, 4739, 4754, 5158, 5309, 5411, 5597, 5604
DpnII |GATC 97, 184, 196, 220, 253, 281, 312, 349, 393, 1163, 1354, 1381, 2018, 2686, 2845, 3471, 3639, 4121, 4171, 4289, 4307, 4371, 4655, 4739, 4754, 5158, 5309, 5411, 5597, 5604
DraI TTT|AAA 593, 723, 1915, 2004, 2395, 2420, 2454, 3095, 3184, 3281
DrdI GACNNNN|NNGTC 3025
EcoRI G|AATTC 276
Fnu4HI GC|NGC 3440, 3602, 4560, 5519
HaeIII GG|CC 1025, 2677, 4867, 5163
HincII GTPy|PuAC 1963, 2594, 5456
HindIII A|AGCTT 1395, 1404, 2110, 4111, 4668
HinfI G|ANTC 32, 55, 147, 630, 1155, 1421, 1784, 1860, 2478, 2639, 2790, 2907, 3671, 3716, 4012, 4088, 4163, 5361, 5482, 5612, 5789
HpaI GTT|AAC 1963, 2594
HpaII C|CGG 94, 256, 285, 309, 442, 4264, 5340, 5723
Hpy188I TCN|GA 187, 279, 391, 398, 415, 423, 464, 508, 1166, 1525, 1706, 1886, 2964, 3032, 3125, 3840, 4115, 4166, 4660, 5312, 5350, 5609
Hpy99I CG[AT]CG| 404, 4003, 4338, 4600, 5287, 5454, 5472, 5499, 5805
HpyCH4III ACN|GT 295, 370, 387, 879, 959, 1730, 1932, 2134, 2993, 3082, 3204, 3788, 4082, 4095, 4195, 4278, 4406, 5102
HpyCH4IV A|CGT 0, 231, 402, 551, 931, 1366, 1498, 2124, 2340, 2754, 2911, 3066, 4215, 4332, 4336, 4505, 4551, 4694, 4713, 5154, 5322, 5768
HpyCH4V TG|CA 1766, 1817, 1851, 2177, 2199, 2872, 3503, 3690, 4509, 5243, 5555, 5838, 5850
MboI |GATC 97, 184, 196, 220, 253, 281, 312, 349, 393, 1163, 1354, 1381, 2018, 2686, 2845, 3471, 3639, 4121, 4171, 4289, 4307, 4371, 4655, 4739, 4754, 5158, 5309, 5411, 5597, 5604
MfeI C|AATTG 1855, 2577
MseI T|TAA 42, 160, 239, 592, 600, 644, 661, 678, 683, 722, 795, 971, 1007, 1011, 1217, 1226, 1267, 1328, 1431, 1559, 1715, 1745, 1914, 1962, 1967, 2003, 2060, 2144, 2170, 2282, 2394, 2419, 2431, 2453, 2462, 2498, 2593, 2625, 2721, 2900, 3094, 3108, 3183, 3241, 3245, 3275, 3280, 3312, 3382, 3425, 3430, 3496, 3558, 3758, 3795, 3992, 4020, 4363, 4664, 4691, 4983, 5091, 5107, 5180, 5383, 5761, 5784, 5843
MslI CAPyNN|NNPuTG 327, 915, 1669, 2207, 2771, 3208, 4952
MspI C|CGG 94, 256, 285, 309, 442, 4264, 5340, 5723
MwoI GCNNNNN|NNGC 1402, 2871, 4109
N.BstNBI GAGTCNNNN|N 1160, 1426
NciI CC|[CG]GG 257, 285
NcoI C|CATGG 1610
NdeI CA|TATG 1191
NlaIII CATG| 119, 654, 1160, 1200, 1237, 1436, 1449, 1481, 1589, 1609, 1955, 2104, 2179, 2201, 2323, 2949, 3208, 3388, 3483, 3688, 4623, 4733
NlaIV GGN|NCC 282, 1026, 1614, 4229, 5598
NruI TCG|CGA 1409
NsiI ATGCA|T 1818, 3691
NspI PuCATG|Py 1437, 2180, 2202, 3484, 3689, 4624
PacI TTAAT|TAA 1011, 3245
PciI A|CATGT 3484, 4624
PflFI GACN|NNGTC 962
PsiI TTA|TAA 584, 744, 921, 1645, 1978, 2800, 3828, 4392, 4460, 4904
PspGI |CC[AT]GG 5259, 5662
PspOMI G|GGCCC 1026
PvuI CGAT|CG 5412
RsaI GT|AC 200, 1500, 2760, 2913, 3076, 3460, 4334, 4696, 4885, 5588
SalI G|TCGAC 5456
Sau3AI |GATC 97, 184, 196, 220, 253, 281, 312, 349, 393, 1163, 1354, 1381, 2018, 2686, 2845, 3471, 3639, 4121, 4171, 4289, 4307, 4371, 4655, 4739, 4754, 5158, 5309, 5411, 5597, 5604
Sau96I G|GNCC 957, 1025, 3902, 4157, 5164
ScaI AGT|ACT 4886, 5589
ScrFI CC|NGG 257, 285, 5259, 5662
SfcI C|TPuPyAG 27
SmlI C|TPyPuAG 679, 1218, 5279
SnaBI TAC|GTA 1499, 3067
SpeI A|CTAGT 2083, 3755, 5437
SphI GCATG|C 1437, 3689
SspI AAT|ATT 1039, 1676, 2163, 4465, 5061
StyI C|C[AT][AT]GG 1610, 2040, 3899
SwaI ATTT|AAAT 3282
Taqƒ¿I T|CGA 405, 482, 544, 851, 927, 1639, 4004, 4526, 5118, 5413, 5455, 5795, 5806
TfiI G|A[AT]TC 32, 55, 147, 630, 1784, 1860, 2478, 2639, 3671, 3716, 4012, 4088, 4163, 5361, 5482, 5612, 5789
TseI G|C[AT]GC 3602, 4560, 5519
Tsp45I |GT[CG]AC 229, 439, 1157, 2329, 3356, 4711, 5542
Tsp509I |AATT 83, 142, 158, 275, 426, 448, 456, 565, 580, 587, 685, 718, 733, 758, 790, 798, 807, 890, 1009, 1105, 1228, 1326, 1444, 1465, 1654, 1743, 1747, 1762, 1792, 1854, 1917, 1936, 1969, 2058, 2196, 2220, 2272, 2457, 2535, 2566, 2576, 2627, 2682, 2712, 2719, 2724, 2825, 2976, 3097, 3110, 3243, 3277, 3314, 3374, 3384, 3428, 3433, 3453, 3499, 3515, 3583, 3595, 3643, 3655, 3990, 4774, 4985, 5020, 5048, 5093, 5113, 5138, 5236, 5642, 5727
TspRI NNCA[CG]TGNN| 373, 2994, 3205, 3714
Tth111I GACN|NNGTC 962
XbaI T|CTAGA 4381, 5740
XmnI GAANN|NNTTC 1619, 2165, 3376, 4219


Click here to view TAIR data

>AT5G05770 genomic sequence (4000-4368,) length:5868
tacgttacac ctttcctaca agacagctat aggaatctat gtattaacct 
50
cgttagaatc caaaaaaaaa aaaaaaaaaa gcctaatttc attatccgga 
100
tcaaataccc taacatttct catgtttatt caaatccaga cgaaattgat 
150
tccagcagaa attaaatatg aagatgacga gcatagatct gatactggat 
200
cgtacATTTA GCGAGCCTCG TGATCTTCTG TGACGTTTCT TTAATACCTA 
250
ACCCGATCCG GGAAGCCTTC TTATTGAATT CGGATCCCGG AGACGACCGT 
300
TTGGATGATG CCGGATCATC TTCATCTTGA TGAACGGACG GGATTGCCCC 
350
GATCTTCTTC AATGTTTGGG ACAGTGAATG AAGCTCCACC GTCCGATCTC 
400
TGAACGTCGA GCCCATcgga gggtcggaat tgaactaaag tcaccggcaa 
450
attgatgaat ttcctcagat gatgagcttt atttcgagag taacgagaga 
500
tgtatcaatc ggagaaagag actgagaaac atatagggag catattcgat 
550
ttacgtcaaa ataacaaatt ttatgttatt caattataaa tttttaaaag 
600
tttaataaaa tctaatgtta ttgaacaagt gattctaaaa tctacttaaa 
650
aatcccatgt tattaaaaac atttgagact taagttaatt tgaatggatt 
700
tacttacttc aaaatacaga attttaaatc tcataatttt aggttataac 
750
aacttcttga atttgagaag attttacaat aaatcataat aaattcttaa 
800
attcactcaa ttttttcaaa atcatataaa aactcaaaat aaatcaaatc 
850
actcgaaata taacattgaa tacatctcca cagtagtaag aaattgatag 
900
aagtgcgtgt cattattatg ttataacatc gaacgtcttg ttgtttttat 
950
tcttgttgga ccgtgtcccg ttttaacatt tggcaaccaa aaggtgtgcg 
1000
tttaggcatt aattaatcta actttgggcc caaaacccaa tattatttcc 
1050
gtctttttta gtttagaaaa gtctttgttt tttttgttgc tgatttccta 
1100
atatcaaatt tgtttcgtat ataagataaa tggaatgaga ccgaagtttt 
1150
ggaatgagtc acatgatccg agccagacca acaaaggaag catatgagaa 
1200
gcatgagaaa aaaatcactt aagtatctta attttgttca tgtttgttgt 
1250
gaagggctta ctaagatatt aataaagaga aaagataaag tgtgagatta 
1300
gaaagttgta tataagaagt gaatggaaat taaaggtttg gggtaatgtt 
1350
ggatggatca gcgacaaacg tggaagcgag gagatccaaa aaggaagctt 
1400
cccaagcttc gcgaggcgta ggagtctaca ttttaagcat gccacaattt 
1450
catgcccttg tttcccaatt ttgcgatttt ttcatgtttt ttttctttta 
1500
cgtacaaata acatttattc aaagttcaga tgttatgatt tatgctttat 
1550
gcttccatac ttaaagattt ttagttatga tttatgcttc catgctttta 
1600
ctttttttgc catggaacca tttctgtaag tatataatca tcgattataa 
1650
acctaaattg ttttcatttt tatgaaatat ttacattctt agcaaaaaaa 
1700
aatagttcag atgttattaa gtgagtgttt actgtttatc aacgaattaa 
1750
ttagtgtgat aaaaatttgc aatataaatg tattgattct ctcaatttac 
1800
caatcgtttt atcttgaatg catttagaga tgggagttcc tgtttttttt 
1850
tttgcaattg gaatcataaa acgagaactt acgcaatctg aacaaggtca 
1900
tttaggatag acattttaaa ttatacaaaa tgacagtaat ttgatttttg 
1950
acaacgcatg atgttaactt aattttctta taagattttt tttttttttt 
2000
ttttttaaaa acttttgatg atcacataca cgacattgac ctaggagtta 
2050
gagcaagaaa attaaaaaac cctttgccaa gaactagtaa ccaaaactta 
2100
tgtcgcatga agcttcattt cttatacgtt atatacagta taacattaat 
2150
agaaaaacta gaaatatttc tttaatggtg catgtaacat cattgggaat 
2200
tgcatgtgag tgggatttac aaatttacaa tgtgagacca ccttccactc 
2250
aatatatata tgttccaaag tgaaattttc gttttaatat aacatacttg 
2300
aatatagaac caaataatat gtatcatgtg tgacgggttc aacgttttca 
2350
aatgtcctaa aagaaacaaa gaaacaaagt ttttgattta ttattttaaa 
2400
atcacaaaac catataaagt ttaaaaatct tgttaaactt cataaaatcc 
2450
gtctttaaaa tttttaatat aaaagtttga ttcatattat tgttctttct 
2500
taaaccaaca tttcgttgat gaaagatggt caaatgaatt ttttgttgtc 
2550
aagctagaga acacctaaat tttttccaat tgatattatg tatgttaaca 
2600
caaaaagagt tatctaatac gattagttaa tttatggatg attccaagta 
2650
gaaacgccaa cataaacttt gactttgagg ccgaattgat ctgcttcttt 
2700
tatttctctt acaaatttga aattaaatta gtcaagtgtg atgataaaat 
2750
acataacgtt tgtacgcatt agtatgttgt gtagcggaga gactcttgtt 
2800
tataaaaaca atgtttggtt tattctaatt gtcattttat tctttggatc 
2850
tttagttctc gcttagcgtc tcgtgcatat ttttcctcaa aatcatcacc 
2900
attaaatgac tcacgtacac aataatcaca acaacataca tatatatcac 
2950
catgccaaaa tacatctgaa aaaaataaat tcctagtcgc tacactgtca 
3000
tattttgatt gatatttaga ctatttagtc attcagataa cattgttacg 
3050
aggaagtata tatacatacg tagcgttgta ctactgtaac tggttttaaa 
3100
tttatagtat taattttgtt gatgttccga ttgaaaaagt cattttagga 
3150
aagaacgaaa aaatagtttg aaagtgattt ttttttaaaa agatataatc 
3200
ctacactgtc atgttttgat tgatatttag tcattttgtg tgttaattaa 
3250
cactttatta tagacagggt tagttattaa tttaaatcta aatgttcttg 
3300
taaaggcttc cacttaattt tctaatcacc atctgccgac caaactactt 
3350
tatcaagtca cagcttttgt ggaaaaattt ccgttaattc atgagctttt 
3400
ctatttgttc acacttcaca caatcattaa attaaatttt gcggctaatg 
3450
ttagaattat cgtacgacaa ctgatcacac gctacatgtt ctctagctta 
3500
aatttgcaac atatataatt gaaacatcac tcaaccccac aggctacaac 
3550
atcccacatt taatcaagaa atcaatcagt tcacaattac tgatgaaatt 
3600
acgcagcaag taaccctagc taactaggat aaaagaaaac gatcaattct 
3650
cgggaaaatt cagtctctcc cgaatcccaa aaacaaaagc atgcatttcg 
3700
taataaacaa cgcactgatt ctgtttgatt ttttctacct ttatcctaca 
3750
caacactagt taaacgacac aaaactcaaa acacgaacac agttacttaa 
3800
tctattcccc ttattctttc tttttgatta taatagcata tcggaaaaaa 
3850
atctacaaac attcaaaaaa acatcatcta ctcatctata tattcaaacc 
3900
ttggtccatt cacatcacga agtccatcgc ctataatcat ataacatatc 
3950
caaaacccta aaacgcaaac actaagataa ctatttcttg aaattaataA 
4000
TGTCGTCGAG AGGATTCAAC ATTAAAGCTA GAGGATTATG TAATAACAAC 
4050
AACGGAGGAG GAGGAACGGG GGCGAAGTGT GGACGGTGGA ATCCAACGGT 
4100
GGAGCAAGTG AAGCTTCTGA CAGATCTGTT CAAGGCGGGA CTGCGAACAC 
4150
CGAGCACGGA CCAGATTCAG AAGATCTCTA TGGAGCTGAG TTTCTACGGT 
4200
AAGATTGAGA GCAAGAACGT GTTCTATTGG TTCCAAAACC ATAAAGCTAG 
4250
AGAGAGACAA AAGTGCCGGA AAATCTCCAC CGTCAAGTTT GATCATCGTC 
4300
AAGATACAGA TCTTTCTAAG CCTCGCCGAG ACAACGTACG TCGTCATCAA 
4350
CTACCAGCGA AAGGTTAAtc aagatctctt tctagattgt tttataatca 
4400
cattttacag tatatattat cagtttatca ctaagacgct aataatgtgt 
4450
cttggtttct tataaatatt tttgaagttt gtaaagtaga agagaaaatg 
4500
atagagacgt tgcaactctt cccattatcg aaagttgaga gagtgagagc 
4550
aaacgttact gctgcgagcc acaacgaata cacacgagag caagcatata 
4600
cgacggcgtt ttctacattc tcaacatgtg gggctgagat ggaacattcg 
4650
ccgttggatc tccgattaag ctttctatga acggatttga tattaacgta 
4700
caactctagt ggtgacgttg ctaagaaata aagacatgat gatcacattt 
4750
atttagatct agctagattt tgacaaattt cccttgtaac aatatcaacc 
4800
taataatatc gttgctacat tttttttcat tagcttcttc tcttcactta 
4850
ttgcctgttc tgttctgtgg cctacccgtg aaatgagtac ttacgattta 
4900
gggttataac attaccatag tggaagggat gatatttctt tttgtatcac 
4950
atttatgatt tacacttttg aaagtctcca caacttaatt tgtcattatt 
5000
ttattttatt ttctcctcta caattcatat tttcagcact cgtttgaaaa 
5050
attacttcaa aatatttgat aaaataagaa ataaaatcct atttaattat 
5100
ccaccgtctt aataaatttt cgagaaatgt atattggaaa attgcccaat 
5150
aaatgacgtg atcaggccca tcatattggg cttaacaaaa gaaaagccca 
5200
ttatagggaa ataaaataaa acgaccatat tagaagcaat ttagtgcaaa 
5250
gtggtttttc ctggagaaga agcaaactct caagctccgt cgggaaaaaa 
5300
aggaaaacca gatcggaaag ttcacgtttt tcaaatcttc tccggagaaa 
5350
tcagattact tgattcttca aacaATGGAT GTGATTAAGA CGCAACAGAT 
5400
TTCAGCAAGG ACGATCGAGA AAGTGGTTGT TCATCCACTA GTCTTGCTTA 
5450
GTATCGTCGA CCATTACAAT CGCGTCGCTA AGGATTCAAG CAAGCGTGTC 
5500
GTCGGTGTTC TTCTGGGGAG CAGCTCTCGT GGTGTTGTTG ATGTCACCAA 
5550
CAGCTATGCA Ggtatgcctt atttatcctt tttcctctag tactcttgga 
5600
tcccagatct cagattctgt tgaggtctct aaactgaaac ttgaattgag 
5650
tggttattca tacctgggtt ctaggcagat gtgtataata acaccattta 
5700
ggtttttttt gtggctgttc tgttccggaa ttgacctctt ctagagttga 
5750
tgtttacttc agttaaatca cgttctcgct agggtttaag attcaatcga 
5800
gcccccgtcg agaaagagat tgttttaggt tgatttagtt gcatttaagt 
5850
ttgcagaggt gcttgctt
5900