fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G06080 LBD33 LOB domain-containing protein 33 (.1)

>AT5G06080.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SalI G|TCGAC 415


Click here to view TAIR data

>AT5G06080.1 length:534
ATGGCAAGTC ATGGATCATC TTGTGGAGCA TGCAAGTTTC TAAGGAGGAA 
50
ATGCAACCGC GACTGCGTCT TCTCGCCTTA CTTCAGCTAC GAACAAGCCT 
100
CTTCCCATTT CGCAGCGGTT CACAAAGTCT TCGGCGCAAG TAATGTCTCT 
150
AAACATTTGC TTCATTTGCC TCAACATCAA AGAAACATCG CTGCTATCAC 
200
CATCTCCTAC GAGGCTCTCT CTCGCATGCG TGATCCTGTT TATGGCTGCG 
250
TTGCTCACAT CTTCGCTCTT CATCAACAGG TTGTGACTTT GCAAGAAGAG 
300
ATTGAGTTTC TCGGGTCACA GATGAAGAAT TTTTCATACT CTAATCAAAA 
350
CGGATCACAA CTTAACAACA TACCGGAGTT TGTGAATCAG ATGACTATGG 
400
CCACGACCAA TTTCGTCGAC GAGAGTGTTT TGAACAATGC CGACGGAAGA 
450
AACTGCTATG ATGGGTTCTT CACGAACTCA GAGGAAATGC TCGTGAATCA 
500
TCAATGGCTC CAGAACATGG ATTATTATTA CTAA
550

>AT5G06080.1 longest ORF length:177
MASHGSSCGA CKFLRRKCNR DCVFSPYFSY EQASSHFAAV HKVFGASNVS 
50
KHLLHLPQHQ RNIAAITISY EALSRMRDPV YGCVAHIFAL HQQVVTLQEE 
100
IEFLGSQMKN FSYSNQNGSQ LNNIPEFVNQ MTMATTNFVD ESVLNNADGR 
150
NCYDGFFTNS EEMLVNHQWL QNMDYYY
200