fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G06100 ATMYB33 myb domain protein 33 (.1.2.3)

>AT5G06100.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 745
KpnI GGTAC|C 579
NcoI C|CATGG 1389
PstI CTGCA|G 66
PvuII CAG|CTG 41, 116, 523, 1193
SacI GAGCT|C 940
StyI C|C[AT][AT]GG 106, 1309, 1389, 1446


Click here to view TAIR data

>AT5G06100.2 length:1563
ATGAGTTACA CGAGCACTGA CAGTGACCAT AATGAGTCAC CAGCTGCTGA 
50
TGATAATGGA AGTGACTGCA GAAGTAGATG GGATGGTCAT GCTCTCAAGA 
100
AAGGCCCTTG GAGTTCAGCT GAAGATGATA TTCTTATTGA CTATGTGAAT 
150
AAGCATGGTG AGGGTAACTG GAATGCTGTG CAGAAACACA CCAGCTTGTT 
200
TCGTTGTGGT AAAAGCTGTC GTCTAAGATG GGCTAATCAT CTGAGGCCAA 
250
ATTTGAAGAA AGGAGCTTTT AGTCAAGAAG AAGAACAGCT TATCGTTGAA 
300
TTGCATGCCA AGATGGGTAA TAGATGGGCA CGTATGGCTG CACATTTGCC 
350
TGGCCGAACG GATAATGAGA TAAAGAATTA TTGGAACACT CGTATCAAGA 
400
GGCGACAACG AGCTGGTTTG CCACTTTATC CTCCTGAGAT GCATGTTGAG 
450
GCACTTGAGT GGAGTCAAGA GTATGCCAAG AGTAGAGTTA TGGGAGAAGA 
500
TAGAAGACAT CAAGATTTCT TGCAGCTGGG GAGTTGTGAA TCTAATGTCT 
550
TCTTTGATAC TCTTAATTTT ACCGACATGG TACCTGGTAC TTTTGATCTA 
600
GCAGATATGA CTGCCTACAA AAATATGGGT AACTGTGCAA GTTCTCCTCG 
650
ATATGAAAAC TTCATGACAC CAACAATCCC CTCCTCGAAG CGACTTTGGG 
700
AATCTGAGTT GTTGTATCCT GGGTGTAGCA GTACCATAAA GCAAGAATTC 
750
TCGTCGCCTG AACAATTCCG GAACACATCT CCACAAACGA TTTCCAAAAC 
800
TTGCAGCTTC TCAGTTCCTT GTGATGTTGA GCATCCTCTC TATGGAAACC 
850
GACATTCACC TGTTATGATT CCAGATAGCC ATACCCCTAC GGATGGCATT 
900
GTTCCTTATT CTAAGCCCTT ATATGGGGCA GTGAAGCTGG AGCTCCCTTC 
950
ATTCCAATAT TCAGAAACAA CATTTGACCA GTGGAAGAAA TCGTCATCTC 
1000
CTCCACACTC TGATCTCCTT GATCCCTTTG ATACTTACAT TCAGTCTCCA 
1050
CCACCACCAA CGGGGGGAGA AGAGTCAGAT TTATATTCAA ATTTTGATAC 
1100
TGGTCTGCTC GATATGTTGC TTCTGGAAGC CAAGATCAGA AATAATAGTA 
1150
CAAAGAACAA TTTGTACAGG AGCTGCGCTT CAACTATTCC ATCAGCTGAT 
1200
CTTGGCCAGG TTACTGTATC CCAAACTAAA TCCGAGGAGT TTGACAATTC 
1250
CCTTAAGAGC TTCTTGGTTC ATTCCGAAAT GTCCACACAA AATGCAGATG 
1300
AAACTCCACC AAGGCAGAGA GAAAAAAAGC GGAAACCTCT CTTGGATATA 
1350
ACAAGGCCTG ACGTTTTGCT TGCATCGAGC TGGCTTGACC ATGGTTTAGG 
1400
GATTGTGAAA GAGACAGGTA GCATGAGCGA CGCACTCGCG GTTCTCCTTG 
1450
GCGATGACAT AGGAAATGAC TATATGAATA TGAGTGTTGG GGCATCCTCA 
1500
GGAGTTGGGT CTTGTTCTTG GAGCAACATG CCACCTGTCT GTCAAATGAC 
1550
AGAACTACCC TAA
1600

>AT5G06100.2 longest ORF length:520
MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN 
50
KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE 
100
LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE 
150
ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL 
200
ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF 
250
SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI 
300
VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP 
350
PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD 
400
LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPRQR EKKRKPLLDI 
450
TRPDVLLASS WLDHGLGIVK ETGSMSDALA VLLGDDIGND YMNMSVGASS 
500
GVGSCSWSNM PPVCQMTELP 
550