fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G06250 AP2/B3-like transcriptional factor family protein (.1.2)

>AT5G06250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 285
SacI GAGCT|C 536, 627


Click here to view TAIR data

>AT5G06250.1 length:804
ATGTCAGTCA ACCATTACTC CACAGACCAC CACCACACTC TCTTGTGGCA 
50
GCAACAGCAA CACCGCCACA CCACCGACAC ATCGGAGACA ACCACCACCG 
100
CCACATGGCT CCACGACGAC CTAAAAGAGT CACTCTTCGA GAAGTCTCTC 
150
ACACCAAGCG ACGTCGGGAA ACTCAACCGC CTCGTCATAC CAAAACAACA 
200
CGCAGAGAAA TACTTCCCTC TCAATGCCGT CCTAGTCTCC TCTGCTGCTG 
250
CTGACACGTC ATCTTCGGAG AAAGGGATGC TTCTAAGCTT TGAAGACGAG 
300
TCAGGCAAGT CATGGAGGTT CAGATACTCT TACTGGAACA GCAGTCAAAG 
350
CTATGTCTTG ACTAAAGGAT GGAGCAGATT TGTCAAAGAC AAACAGCTCG 
400
ATCCAGGCGA CGTTGTTTTC TTCCAACGAC ACCGTTCTGA TTCTAGGAGA 
450
CTCTTCATTG GCTGGCGCAG ACGTGGACAA GGCTCCTCAT CCTCCGTCGC 
500
GGCCACTAAC TCCGCCGTGA ATACGAGTTC TATGGGAGCT CTTTCTTATC 
550
ATCAAATCCA CGCCACTAGA GCCGCCGTAG CAACAGCGGC TGAGACTCAC 
600
AGCACACCGT CGTCTTCCGT CGTCGGGAGC TCAAGGACGG TGAGGCTTTT 
650
CGGTGTGAAT CTGGAGTGTC AAATGGATGA AAACGACGGA GATGATTCTG 
700
TTGCAGTTGC CACCACCGTT GAATCTCCCG ACGGTTACTA CGGCCAAAAC 
750
ATGTACTATT ATTACTCTCA TCCTCATAAC ATGGTAATTT TAACTCTTTT 
800
ATAA
850

>AT5G06250.1 longest ORF length:267
MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL 
50
TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE 
100
SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR 
150
LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATR AAVATAAETH 
200
STPSSSVVGS SRTVRLFGVN LECQMDENDG DDSVAVATTV ESPDGYYGQN 
250
MYYYYSHPHN MVILTLL
300