Locus |
Common name |
Short description |
AT5G06510 |
NF-YA10 |
"nuclear factor Y, subunit A10", nuclear factor Y, subunit A10 (.1.2.3) |
>AT5G06510.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
92 |
KpnI
| GGTAC|C |
400 |
NcoI
| C|CATGG |
429 |
PstI
| CTGCA|G |
689 |
PvuII
| CAG|CTG |
572 |
StyI
| C|C[AT][AT]GG |
37, 429 |
Click here to view TAIR data
>AT5G06510.2 length:810
ATGCAAACTG AGGAGCTTTT GTCGCCACCA CAGACTCCTT GGTGGAATGC | 50 |
TTTTGGATCT CAGCCGTTGA CTACAGAGAG CCTTTCCGGC GAAGCTTCTG | 100 |
ATTCATTCAC CGGAGTTAAG GCAGTTACTA CGGAGGCAGA ACAAGGTGTG | 150 |
GTGGATAAAC AAACTTCTAC AACTCTCTTC ACTTTCTCAC CTGGTGGTGA | 200 |
AAAGAGTTCA AGAGATGTGC CAAAGCCTCA TGTTGCTTTC GCGATGCAAT | 250 |
CAGCTTGCTT CGAGTTTGGA TTTGCTCAGC CAATGATGTA CACAAAGCAT | 300 |
CCTCATGTTG AACAATACTA TGGAGTTGTT TCAGCATACG GATCTCAGAG | 350 |
GTCTTCGGGC CGAGTAATGA TTCCACTGAA GATGGAGACA GAAGAAGATG | 400 |
GTACCATCTA TGTGAACTCA AAGCAGTACC ATGGAATTAT CAGGCGACGC | 450 |
CAGTCCCGAG CAAAGGCTGA AAAACTGAGT AGATGCCGTA AGCCATATAT | 500 |
GCATCACTCA CGCCATCTCC ATGCTATGCG CCGTCCTAGA GGATCTGGCG | 550 |
GGCGTTTCTT GAACACCAAG ACAGCTGATG CGGCTAAGCA GTCTAAGCCG | 600 |
AGTAATTCTC AGAGTTCTGA AGTCTTTCAT CCGGAAAATG AGACCATAAA | 650 |
CTCATCGAGG GAAGCAAATG AGTCAAATCT CTCGGATTCT GCAGTTACAA | 700 |
GTATGGATTA CTTTCTAAGT TCGTCGGCTT ATTCTCCTGG TGGCATGGTC | 750 |
ATGCCTATCA AGTGGAATGC AGCAGCAATG GATATTGGCT GCTGCAAACT | 800 |
TAATATATGA | 850 |
>AT5G06510.2 longest ORF length:269
MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV | 50 |
VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH | 100 |
PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR | 150 |
QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP | 200 |
SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV | 250 |
MPIKWNAAAM DIGCCKLNI | 300 |
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