fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G06510 NF-YA10 "nuclear factor Y, subunit A10", nuclear factor Y, subunit A10 (.1.2.3)

>AT5G06510.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 92
KpnI GGTAC|C 400
NcoI C|CATGG 429
PstI CTGCA|G 689
PvuII CAG|CTG 572
StyI C|C[AT][AT]GG 37, 429


Click here to view TAIR data

>AT5G06510.2 length:810
ATGCAAACTG AGGAGCTTTT GTCGCCACCA CAGACTCCTT GGTGGAATGC 
50
TTTTGGATCT CAGCCGTTGA CTACAGAGAG CCTTTCCGGC GAAGCTTCTG 
100
ATTCATTCAC CGGAGTTAAG GCAGTTACTA CGGAGGCAGA ACAAGGTGTG 
150
GTGGATAAAC AAACTTCTAC AACTCTCTTC ACTTTCTCAC CTGGTGGTGA 
200
AAAGAGTTCA AGAGATGTGC CAAAGCCTCA TGTTGCTTTC GCGATGCAAT 
250
CAGCTTGCTT CGAGTTTGGA TTTGCTCAGC CAATGATGTA CACAAAGCAT 
300
CCTCATGTTG AACAATACTA TGGAGTTGTT TCAGCATACG GATCTCAGAG 
350
GTCTTCGGGC CGAGTAATGA TTCCACTGAA GATGGAGACA GAAGAAGATG 
400
GTACCATCTA TGTGAACTCA AAGCAGTACC ATGGAATTAT CAGGCGACGC 
450
CAGTCCCGAG CAAAGGCTGA AAAACTGAGT AGATGCCGTA AGCCATATAT 
500
GCATCACTCA CGCCATCTCC ATGCTATGCG CCGTCCTAGA GGATCTGGCG 
550
GGCGTTTCTT GAACACCAAG ACAGCTGATG CGGCTAAGCA GTCTAAGCCG 
600
AGTAATTCTC AGAGTTCTGA AGTCTTTCAT CCGGAAAATG AGACCATAAA 
650
CTCATCGAGG GAAGCAAATG AGTCAAATCT CTCGGATTCT GCAGTTACAA 
700
GTATGGATTA CTTTCTAAGT TCGTCGGCTT ATTCTCCTGG TGGCATGGTC 
750
ATGCCTATCA AGTGGAATGC AGCAGCAATG GATATTGGCT GCTGCAAACT 
800
TAATATATGA 
850

>AT5G06510.2 longest ORF length:269
MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV 
50
VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH 
100
PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR 
150
QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP 
200
SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV 
250
MPIKWNAAAM DIGCCKLNI
300