Locus |
Common name |
Short description |
AT5G06510 |
NF-YA10 |
"nuclear factor Y, subunit A10", nuclear factor Y, subunit A10 (.1.2.3) |
>AT5G06510.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
KpnI
| GGTAC|C |
253 |
NcoI
| C|CATGG |
282 |
PstI
| CTGCA|G |
542 |
PvuII
| CAG|CTG |
425 |
StyI
| C|C[AT][AT]GG |
282 |
Click here to view TAIR data
>AT5G06510.3 length:663
ATGCAAATGT TTGAAGGTGA TTTTATTTAT GCTGTCATTG ATTTAGGTGG | 50 |
TGAAAAGAGT TCAAGAGATG TGCCAAAGCC TCATGTTGCT TTCGCGATGC | 100 |
AATCAGCTTG CTTCGAGTTT GGATTTGCTC AGCCAATGAT GTACACAAAG | 150 |
CATCCTCATG TTGAACAATA CTATGGAGTT GTTTCAGCAT ACGGATCTCA | 200 |
GAGGTCTTCG GGCCGAGTAA TGATTCCACT GAAGATGGAG ACAGAAGAAG | 250 |
ATGGTACCAT CTATGTGAAC TCAAAGCAGT ACCATGGAAT TATCAGGCGA | 300 |
CGCCAGTCCC GAGCAAAGGC TGAAAAACTG AGTAGATGCC GTAAGCCATA | 350 |
TATGCATCAC TCACGCCATC TCCATGCTAT GCGCCGTCCT AGAGGATCTG | 400 |
GCGGGCGTTT CTTGAACACC AAGACAGCTG ATGCGGCTAA GCAGTCTAAG | 450 |
CCGAGTAATT CTCAGAGTTC TGAAGTCTTT CATCCGGAAA ATGAGACCAT | 500 |
AAACTCATCG AGGGAAGCAA ATGAGTCAAA TCTCTCGGAT TCTGCAGTTA | 550 |
CAAGTATGGA TTACTTTCTA AGTTCGTCGG CTTATTCTCC TGGTGGCATG | 600 |
GTCATGCCTA TCAAGTGGAA TGCAGCAGCA ATGGATATTG GCTGCTGCAA | 650 |
ACTTAATATA TGA | 700 |
>AT5G06510.3 longest ORF length:220
MQMFEGDFIY AVIDLGGEKS SRDVPKPHVA FAMQSACFEF GFAQPMMYTK | 50 |
HPHVEQYYGV VSAYGSQRSS GRVMIPLKME TEEDGTIYVN SKQYHGIIRR | 100 |
RQSRAKAEKL SRCRKPYMHH SRHLHAMRRP RGSGGRFLNT KTADAAKQSK | 150 |
PSNSQSSEVF HPENETINSS REANESNLSD SAVTSMDYFL SSSAYSPGGM | 200 |
VMPIKWNAAA MDIGCCKLNI | 250 |
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