Locus |
Common name |
Short description |
AT5G06650 |
GIS2 |
GLABROUS INFLORESCENCE STEMS 2, C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT5G06650.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
510 |
StyI
| C|C[AT][AT]GG |
207, 451, 510 |
Click here to view TAIR data
>AT5G06650.1 length:576
ATGAAGACTT ATGATTTCAT GAACGTCAAC TCTTTCTCTC CTAAGGAAAG | 50 |
ACCCATTCGC CTCTTTGGCT TCGAGTTTGG AGCTTCTCAT GAAGAATCTG | 100 |
AGTCCAAAGA CAATTACAAC GAGAACAATG AAAGCATCAA AGACGATAAC | 150 |
AAAGAAAAAA GATTCAAGTG CCACTATTGT TTCCGGAACT TCCCTACTTC | 200 |
ACAAGCCCTA GGCGGCCATC AAAACGCTCA CAAGAGAGAA CGTCAACAAA | 250 |
CTAAACGCTT CAACCTCCAT TCAAACGCAG CCGCTTTCTT CCACCGCCAA | 300 |
CAAAACCACA TTGCTGCTTC TAGGCTCTAC GAGGATCGCT ATAGCCTTGA | 350 |
AGCTGTTCAA ATCAACGACG CGAGATTAGG GTTATGTCGT ATGTATAACT | 400 |
CATCTGCGAG TTTTAATCGT GACCGTTCAT CTTATTATAA TAGATATATT | 450 |
CCTTGGTTCA TCGGTGATCA CCAGACTAGA CCAACGTATG TCGGTGGTGG | 500 |
TAGCAGCAGC CATGGTCTGT TTTACGAGTC CAAGAAGAAT GTACCGGACC | 550 |
ACGTGAGTTT GGATCTACGC CTCTAG | 600 |
>AT5G06650.1 longest ORF length:191
MKTYDFMNVN SFSPKERPIR LFGFEFGASH EESESKDNYN ENNESIKDDN | 50 |
KEKRFKCHYC FRNFPTSQAL GGHQNAHKRE RQQTKRFNLH SNAAAFFHRQ | 100 |
QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI | 150 |
PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L | 200 |
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