fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G06650 GIS2 GLABROUS INFLORESCENCE STEMS 2, C2H2 and C2HC zinc fingers superfamily protein (.1)

>AT5G06650.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 510
StyI C|C[AT][AT]GG 207, 451, 510


Click here to view TAIR data

>AT5G06650.1 length:576
ATGAAGACTT ATGATTTCAT GAACGTCAAC TCTTTCTCTC CTAAGGAAAG 
50
ACCCATTCGC CTCTTTGGCT TCGAGTTTGG AGCTTCTCAT GAAGAATCTG 
100
AGTCCAAAGA CAATTACAAC GAGAACAATG AAAGCATCAA AGACGATAAC 
150
AAAGAAAAAA GATTCAAGTG CCACTATTGT TTCCGGAACT TCCCTACTTC 
200
ACAAGCCCTA GGCGGCCATC AAAACGCTCA CAAGAGAGAA CGTCAACAAA 
250
CTAAACGCTT CAACCTCCAT TCAAACGCAG CCGCTTTCTT CCACCGCCAA 
300
CAAAACCACA TTGCTGCTTC TAGGCTCTAC GAGGATCGCT ATAGCCTTGA 
350
AGCTGTTCAA ATCAACGACG CGAGATTAGG GTTATGTCGT ATGTATAACT 
400
CATCTGCGAG TTTTAATCGT GACCGTTCAT CTTATTATAA TAGATATATT 
450
CCTTGGTTCA TCGGTGATCA CCAGACTAGA CCAACGTATG TCGGTGGTGG 
500
TAGCAGCAGC CATGGTCTGT TTTACGAGTC CAAGAAGAAT GTACCGGACC 
550
ACGTGAGTTT GGATCTACGC CTCTAG
600

>AT5G06650.1 longest ORF length:191
MKTYDFMNVN SFSPKERPIR LFGFEFGASH EESESKDNYN ENNESIKDDN 
50
KEKRFKCHYC FRNFPTSQAL GGHQNAHKRE RQQTKRFNLH SNAAAFFHRQ 
100
QNHIAASRLY EDRYSLEAVQ INDARLGLCR MYNSSASFNR DRSSYYNRYI 
150
PWFIGDHQTR PTYVGGGSSS HGLFYESKKN VPDHVSLDLR L
200