| Locus |
Common name |
Short description |
| AT5G06710 |
HAT14 |
homeobox from Arabidopsis thaliana (.1.2) |
>AT5G06710.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, BtgI, BtrI, BtsI, ClaI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeIII, HgaI, HindIII, HpaI, HphI, I-CeuI, I-SceI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TfiI, TliI, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AccI
| GT|[AC][TG]AC |
90, 317 |
| AciI
| C|CGC |
407 |
| AluI
| AG|CT |
270, 276, 346, 514, 611 |
| ApoI
| Pu|AATTPy |
235, 679, 694 |
| AseI
| AT|TAAT |
70 |
| BamHI
| G|GATCC |
556 |
| BanI
| G|GPyPuCC |
210, 387 |
| BfaI
| C|TAG |
5, 17, 390, 561 |
| BsaHI
| GPu|CGPyC |
210 |
| BsmI
| GAATGCN| |
333 |
| BspT107I(HgiCI)
| G|G[TC][AG]CC |
210, 387 |
| BsrFI
| Pu|CCGGPy |
207 |
| BstF5I
| GGATGNN| |
193 |
| BstYI
| Pu|GATCPy |
111, 258, 556 |
| Bsu36I
| CC|TNAGG |
339 |
| Cac8I
| GCN|NGC |
526 |
| Cfr10I
| [AG]|CCGG[TC] |
207 |
| DdeI
| C|TNAG |
31, 301, 338, 573 |
| DpnI
| GA-CH3|TC |
110, 156, 257, 510, 555 |
| DpnII
| |GATC |
110, 156, 257, 510, 555 |
| DraI
| TTT|AAA |
675 |
| Fnu4HI
| GC|NGC |
345, 407 |
| HaeII
| PuGCGC|Py |
210 |
| HhaI
| GCG|C |
209 |
| HinP1I
| G|CGC |
209 |
| HincII
| GTPy|PuAC |
90, 317 |
| HinfI
| G|ANTC |
577 |
| HpaII
| C|CGG |
206, 410 |
| Hpy188I
| TCN|GA |
102, 228 |
| Hpy99I
| CG[AT]CG| |
88, 181, 424 |
| HpyCH4III
| ACN|GT |
38, 307, 351, 625, 660 |
| HpyCH4IV
| A|CGT |
422 |
| HpyCH4V
| TG|CA |
122 |
| KasI
| G|GCGCC |
210 |
| MboI
| |GATC |
110, 156, 257, 510, 555 |
| MfeI
| C|AATTG |
436 |
| MseI
| T|TAA |
69, 450, 633, 674 |
| MspI
| C|CGG |
206, 410 |
| MwoI
| GCNNNNN|NNGC |
216, 522 |
| NarI
| GG|CGCC |
210 |
| NlaIII
| CATG| |
124 |
| NlaIV
| GGN|NCC |
210, 296, 387, 556 |
| RsaI
| GT|AC |
627 |
| SalI
| G|TCGAC |
90, 317 |
| Sau3AI
| |GATC |
110, 156, 257, 510, 555 |
| SfcI
| C|TPuPyAG |
254 |
| SfoI
| GGC|GCC |
210 |
| Taqƒ¿I
| T|CGA |
62, 89, 316 |
| TseI
| G|C[AT]GC |
345 |
| Tsp45I
| |GT[CG]AC |
151 |
| Tsp509I
| |AATT |
234, 290, 435, 678, 693 |
| XmnI
| GAANN|NNTTC |
40, 698 |
Click here to view TAIR data
>AT5G06710.2 length:714
ATGGAACTAG CGTTGTCTCT AGGCGACAAT ACTAAGAAAC AGTTCTCTTT | 50 |
TATGGAGAAG AACTCGAAGA TTAATAATCC CTCTGTCTCG TCGACATCTA | 100 |
CTTCCGAGAA GGATCTTGGG TTCTGCATGG CTTTAGATGT TGCTTTTGGT | 150 |
GGTCACAGAT CGTTGTCATC CTCTTCGTCT CCGTCGGTAG AGGATGAGAA | 200 |
GAAGAAACCG GCGCCCAGAG CAAAAAAATC TGACGAATTT AGGGTTTCGT | 250 |
CTTCTGTAGA TCCACCATTA CAGCTTCAGC TTCACTTCCC TAATTGGCTC | 300 |
CCTGAGAACA GTAAAGGTCG ACAAGGAGGA AGAATGCCCT TAGGAGCAGC | 350 |
TACGGTTGTG GAGGAGGAAG AGGAGGAGGA GGAAGCGGTG CCTAGTATGT | 400 |
CAGTATCGCC GCCGGATAGT GTAACGTCGT CGTTTCAATT GGACTTTGGG | 450 |
ATTAAAAGTT ATGGTTATGA GAGAAGAAGC AATAAGAGAG ATATTGATGA | 500 |
TGAAGTGGAG AGATCAGCTT CAAGAGCCAG CAACGAAGAC AACGATGACG | 550 |
AGAATGGATC CACTAGGAAG AAACTTAGAC TCTCCAAAGA CCAATCTGCT | 600 |
TTTCTTGAAG ACAGCTTCAA AGAACACAGT ACCCTTAATC CTGTTCGTGT | 650 |
CCCATTCTTT ACAGTTTTTA TTTATTTAAA ATTTGTCTTT CTTGAATTTA | 700 |
TTCTATTTTT TTAG | 750 |
>AT5G06710.2 longest ORF length:237
MELALSLGDN TKKQFSFMEK NSKINNPSVS STSTSEKDLG FCMALDVAFG | 50 |
GHRSLSSSSS PSVEDEKKKP APRAKKSDEF RVSSSVDPPL QLQLHFPNWL | 100 |
PENSKGRQGG RMPLGAATVV EEEEEEEEAV PSMSVSPPDS VTSSFQLDFG | 150 |
IKSYGYERRS NKRDIDDEVE RSASRASNED NDDENGSTRK KLRLSKDQSA | 200 |
FLEDSFKEHS TLNPVRVPFF TVFIYLKFVF LEFILFF | 250 |
|