Locus |
Common name |
Short description |
AT5G06770 |
|
KH domain-containing protein / zinc finger (CCCH type) family protein (.1) |
>AT5G06770.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
626 |
NdeI
| CA|TATG |
659 |
PstI
| CTGCA|G |
206 |
Click here to view TAIR data
>AT5G06770.1 length:723
ATGGATGCTC GTAAGAGAGG ACGCCCTGAA GCTGCTGCCT CTCACAACTC | 50 |
CAATGGCGGA TTCAAGAGGT CTAAGCAAGA GATGGAATCA ATTTCAACTG | 100 |
GTTTAGGAAG CAAATCCAAG CCATGCACTA AATTTTTCAG CACTTCTGGA | 150 |
TGTCCATTTG GTGACAATTG CCACTTCTTG CACTATGTGC CCGGTGGGTA | 200 |
CAATGCTGCA GCGCAGATGA CAAATCTCCG ACCACCGGTT TCTCAAGTTT | 250 |
CCAGAAATAT GCAAGGATCT GGTGGTCCCG GCGGCAGATT CTCAGGGAGA | 300 |
GGAGATCCAG GATCAGGCCC TGTTTCAATC TTTGGTGCTT CTACTTCCAA | 350 |
GATCAGTGTA GATGCTTCTT TAGCCGGTGC CATCATTGGA AAAGGTGGAA | 400 |
TCCATTCCAA ACAGATATGC CGTGAAACAG GAGCAAAATT ATCGATTAAA | 450 |
GATCATGAAA GAGACCCAAA CTTGAAGATT ATCGAGCTGG AAGGAACATT | 500 |
TGAACAGATC AATGTAGCGA GTGGGATGGT GAGAGAGCTT ATAGGGAGGC | 550 |
TTGGATCAGT GAAGAAACCT CAAGGGATTG GTGGTCCTGA AGGGAAACCA | 600 |
CATCCTGGGA GCAACTACAA AACCAAGATC TGTGATAGGT ACTCTAAAGG | 650 |
GAACTGTACA TATGGAGATA GATGCCATTT TGCTCATGGT GAATCTGAGC | 700 |
TGCGCAGGTC AGGAATCGCT TAG | 750 |
>AT5G06770.1 longest ORF length:240
MDARKRGRPE AAASHNSNGG FKRSKQEMES ISTGLGSKSK PCTKFFSTSG | 50 |
CPFGDNCHFL HYVPGGYNAA AQMTNLRPPV SQVSRNMQGS GGPGGRFSGR | 100 |
GDPGSGPVSI FGASTSKISV DASLAGAIIG KGGIHSKQIC RETGAKLSIK | 150 |
DHERDPNLKI IELEGTFEQI NVASGMVREL IGRLGSVKKP QGIGGPEGKP | 200 |
HPGSNYKTKI CDRYSKGNCT YGDRCHFAHG ESELRRSGIA | 250 |
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