fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G07060 MAC5C MOS4-associated complex subunit 5C, CCCH-type zinc fingerfamily protein with RNA-binding domain (.1.2)

>AT5G07060.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 430


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>AT5G07060.1 length:1092
ATGTCTCACA GGGATCATGG AGCCGATGGA TGGGAAAGCG CCGATTTCCC 
50
AATCACCTGC GAATCTTGCT TCGGTGACAA TCCGTACATG CGAATGACCC 
100
GAGCGGATTA TGATAAGGAA TGCAAGATAT GTAGTCGTCC TTTCACAGCT 
150
TTTAGGTGGC GACCAGGCCG GAATGCTAGA TTCAAGAAAA CCGAGATTTG 
200
TCAAACTTGC TCTAAGCTAA AAAATGTATG CCAAGTCTGT CTTCTGGATC 
250
TCGGTTTTGG TCTTCCTGTT CAGGTCAGAG ACTCAGCACT CAATATTAAT 
300
TCTCACTACT CTGTCCCAAT GAGCCATGTC AACAGAGAGT ACTTTGCTGA 
350
CGAGCATGAC CCAAAGACTA GAGCTGGACT GGATTATGAA TCTTCATTTG 
400
GGAAGATGCA ACCTAATGAT ACTATTTTAA AGCTTCAGAG AAGAACACCT 
450
TCCTATGAAA AGAACCGGCC AAAAATTTGT AGTTTCTACA CCATTGGTCA 
500
GTGTAAAAGA GGTGCCGAAT GTTCATTCCG GCATGAGATG CCCGAAACAG 
550
GAGAGCTATC CCATCAAAAC ATAAGAGATC GTTATTATAG TGTAAATGAT 
600
CCAGTCGCGA TGAAGTTACT CAGAAAAGCT GGTGAGATGG GCACTTTGGA 
650
ACCACCAGAG GATGAAAGCA TCAAAACACT TTACGTCGGT GGACTTAACT 
700
CAAGAATCTT TGAGCAGGAC ATACATGACC ACTTCTACGC TTATGGAGAA 
750
ATGGAATCTA TCAGAGTCAT GGCCGAGGAT GGCAAATATG ATCAAAGTGG 
800
TTCAAACCAA CAGCAACAGG GCAGTATCGC TCATACTGGA TTAATATCTC 
850
AGCAGCAGAA TCAACACTCA CAAATGCAGC AGTACTATAT GCAGCCACCA 
900
CCACCTAACG AATACAGTCA TTACCCATCA ATGGACACGC AGAGAATGGG 
950
TGCAGCCTTT TCAACCCAAG AGAGTGATGG TTCAAGCACC AGTGAGAACA 
1000
ACAGAGCTTA TTCTTCTTAC TCTTACCCGA TGCCACCACA CCAGCCGTAC 
1050
CCCACACCAC CACCATATAT AGATATATAT ATATATATAT GA
1100

>AT5G07060.1 longest ORF length:363
MSHRDHGADG WESADFPITC ESCFGDNPYM RMTRADYDKE CKICSRPFTA 
50
FRWRPGRNAR FKKTEICQTC SKLKNVCQVC LLDLGFGLPV QVRDSALNIN 
100
SHYSVPMSHV NREYFADEHD PKTRAGLDYE SSFGKMQPND TILKLQRRTP 
150
SYEKNRPKIC SFYTIGQCKR GAECSFRHEM PETGELSHQN IRDRYYSVND 
200
PVAMKLLRKA GEMGTLEPPE DESIKTLYVG GLNSRIFEQD IHDHFYAYGE 
250
MESIRVMAED GKYDQSGSNQ QQQGSIAHTG LISQQQNQHS QMQQYYMQPP 
300
PPNEYSHYPS MDTQRMGAAF STQESDGSST SENNRAYSSY SYPMPPHQPY 
350
PTPPPYIDIY IYI
400