Locus |
Common name |
Short description |
AT5G07160 |
|
Basic-leucine zipper (bZIP) transcription factor family protein (.1) |
>AT5G07160.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
305 |
NcoI
| C|CATGG |
239 |
SacI
| GAGCT|C |
244 |
StyI
| C|C[AT][AT]GG |
239 |
XbaI
| T|CTAGA |
309 |
Click here to view TAIR data
>AT5G07160.1 length:453
ATGAGTTTCC CTGTGGTTGC GACATCGTTT GGAGTGTCCC AAAGTGGCAG | 50 |
CCAAGCGGGA AAGAAGAAAG GTGGTTACGT CAACTATGAA GTCGAGCCAG | 100 |
GCTTCACCAT TCGTATGCGT CAGAATATTG ATCCCACCAC GGACCCTAAG | 150 |
ATACTCAAAC GGATAATTTC GAACCGTGTT GCGGCTCAAA AGTCTAGGTG | 200 |
GAAGAAGGTT CAATATCTTG ATGCTCTAGT GAAGAGATCC ATGGAGCTCC | 250 |
AAAGAGAGGT GAGTGAGTTG CGTTCCCAAC TAGCGATTAC CAGTGAACAA | 300 |
AAACGATATC TAGAAAATGA GCAAAGGCAG CTAAAGGAGT GTATCTCTGC | 350 |
TCGGGTTCAA CATTGTATCA ACAGCGATGG TGTCATTGAG GAGTATAAAA | 400 |
CGGAGATAGA GAGGCTGAAG ACGAATCTGG CTCCACTCTC CAATCTTACT | 450 |
TAG | 500 |
>AT5G07160.1 longest ORF length:150
MSFPVVATSF GVSQSGSQAG KKKGGYVNYE VEPGFTIRMR QNIDPTTDPK | 50 |
ILKRIISNRV AAQKSRWKKV QYLDALVKRS MELQREVSEL RSQLAITSEQ | 100 |
KRYLENEQRQ LKECISARVQ HCINSDGVIE EYKTEIERLK TNLAPLSNLT | 150 |
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