fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G07160 Basic-leucine zipper (bZIP) transcription factor family protein (.1)

>AT5G07160.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 305
NcoI C|CATGG 239
SacI GAGCT|C 244
StyI C|C[AT][AT]GG 239
XbaI T|CTAGA 309


Click here to view TAIR data

>AT5G07160.1 length:453
ATGAGTTTCC CTGTGGTTGC GACATCGTTT GGAGTGTCCC AAAGTGGCAG 
50
CCAAGCGGGA AAGAAGAAAG GTGGTTACGT CAACTATGAA GTCGAGCCAG 
100
GCTTCACCAT TCGTATGCGT CAGAATATTG ATCCCACCAC GGACCCTAAG 
150
ATACTCAAAC GGATAATTTC GAACCGTGTT GCGGCTCAAA AGTCTAGGTG 
200
GAAGAAGGTT CAATATCTTG ATGCTCTAGT GAAGAGATCC ATGGAGCTCC 
250
AAAGAGAGGT GAGTGAGTTG CGTTCCCAAC TAGCGATTAC CAGTGAACAA 
300
AAACGATATC TAGAAAATGA GCAAAGGCAG CTAAAGGAGT GTATCTCTGC 
350
TCGGGTTCAA CATTGTATCA ACAGCGATGG TGTCATTGAG GAGTATAAAA 
400
CGGAGATAGA GAGGCTGAAG ACGAATCTGG CTCCACTCTC CAATCTTACT 
450
TAG
500

>AT5G07160.1 longest ORF length:150
MSFPVVATSF GVSQSGSQAG KKKGGYVNYE VEPGFTIRMR QNIDPTTDPK 
50
ILKRIISNRV AAQKSRWKKV QYLDALVKRS MELQREVSEL RSQLAITSEQ 
100
KRYLENEQRQ LKECISARVQ HCINSDGVIE EYKTEIERLK TNLAPLSNLT 
150