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| Locus | Common name | Short description |
| AT5G07310 | Integrase-type DNA-binding superfamily protein (.1) |
>AT5G07310.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 326, 530, 542 |
| AflII | C|TTAAG | 406 |
| AgeI | A|CCGGT | 481 |
| AluI | AG|CT | 167, 310, 373, 385, 400, 448, 626 |
| ApoI | Pu|AATTPy | 6, 317, 515, 687 |
| AvaI | C|PyCGPuG | 352 |
| AvaII | G|G[AT]CC | 483 |
| BamHI | G|GATCC | 324 |
| BanII | GPuGCPy|C | 449 |
| BfaI | C|TAG | 455, 468 |
| BsaJI | C|CNNGG | 128, 295 |
| BsaWI | [AT]|CCGG[AT] | 481, 646 |
| BsiHKAI | G[AT]GC[AT]|C | 449 |
| BslI | CCNNNNN|NNGG | 36, 780 |
| BsoBI | C|PyCGPuG | 352 |
| Bsp1286I | G[GAT]GC[CAT]|C | 449 |
| BspHI | T|CATGA | 174 |
| BsrFI | Pu|CCGGPy | 228, 481, 634 |
| BstF5I | GGATGNN| | 52 |
| BstYI | Pu|GATCPy | 216, 324, 706 |
| BtgI | C|CPuPyGG | 128, 295 |
| Cac8I | GCN|NGC | 123 |
| Cfr10I | [AG]|CCGG[TC] | 228, 481, 634 |
| DdeI | C|TNAG | 134, 442 |
| DpnI | GA-CH3|TC | 105, 215, 245, 323, 705 |
| DpnII | |GATC | 105, 215, 245, 323, 705 |
| EaeI | Py|GGCCPu | 632 |
| EcoO109I | PuG|GNCCPy | 29 |
| EcoRI | G|AATTC | 6 |
| Fnu4HI | GC|NGC | 166, 309, 336, 375, 399 |
| HaeIII | GG|CC | 27, 631 |
| HinfI | G|ANTC | 45, 143, 762 |
| HpaII | C|CGG | 227, 480, 633, 645 |
| Hpy188I | TCN|GA | 48, 668 |
| HpyCH4IV | A|CGT | 671 |
| HpyCH4V | TG|CA | 613 |
| MboI | |GATC | 105, 215, 245, 323, 705 |
| MseI | T|TAA | 405, 561, 617 |
| MslI | CAPyNN|NNPuTG | 345 |
| MspA1I | C[AC]G|C[GT]G | 311 |
| MspI | C|CGG | 227, 480, 633, 645 |
| MwoI | GCNNNNN|NNGC | 375, 456 |
| NcoI | C|CATGG | 128, 295 |
| NlaIII | CATG| | 118, 127, 173, 294 |
| NlaIV | GGN|NCC | 231, 324 |
| NsiI | ATGCA|T | 614 |
| NspI | PuCATG|Py | 119 |
| PshAI | GACNN|NNGTC | 148 |
| PvuII | CAG|CTG | 311 |
| RsaI | GT|AC | 471 |
| SacI | GAGCT|C | 449 |
| Sau3AI | |GATC | 105, 215, 245, 323, 705 |
| Sau96I | G|GNCC | 28, 483 |
| SfcI | C|TPuPyAG | 273 |
| SmlI | C|TPyPuAG | 146, 242, 406 |
| SpeI | A|CTAGT | 469 |
| StyI | C|C[AT][AT]GG | 128, 295 |
| Taqƒ¿I | T|CGA | 34 |
| TfiI | G|A[AT]TC | 45, 762 |
| TseI | G|C[AT]GC | 166, 309, 336, 375, 399 |
| Tsp509I | |AATT | 5, 14, 316, 434, 514, 686, 776 |
| XcmI | CCANNNNN|NNNNTGG | 304 |
| XmnI | GAANN|NNTTC | 85 |
Click here to view TAIR data
>AT5G07310.1 length:792
ATGGCGAATT CAGGAAATTA TGGAAAGAGG CCCTTTCGAG GCGATGAATC | 50 |
GGATGAAAAG AAAGAAGCCG ATGATGATGA GAACATATTC CCTTTCTTCT | 100 |
CTGCCCGATC CCAATATGAC ATGCGTGCCA TGGTCTCAGC CTTGACTCAA | 150 |
GTCATTGGAA ACCAAAGCAG CTCTCATGAT AATAACCAAC ATCAACCTGT | 200 |
TGTGTATAAT CAACAAGATC CTAACCCACC GGCTCCTCCA ACTCAAGATC | 250 |
AAGGGCTATT GAGGAAGAGG CACTATAGAG GGGTAAGACA ACGACCATGG | 300 |
GGAAAGTGGG CAGCTGAAAT TCGGGATCCG CAAAAGGCAG CACGGGTGTG | 350 |
GCTCGGGACA TTTGAGACTG CTGAAGCTGC GGCTTTAGCT TATGATAACG | 400 |
CAGCTCTTAA GTTCAAAGGA AGCAAAGCCA AACTCAATTT CCCTGAGAGA | 450 |
GCTCAACTAG CAAGTAACAC TAGTACAACT ACCGGTCCAC CAAACTATTA | 500 |
TTCTTCTAAT AATCAAATTT ACTACTCAAA TCCGCAGACT AATCCGCAAA | 550 |
CCATACCTTA TTTTAACCAA TACTACTATA ACCAATATCT TCATCAAGGG | 600 |
GGGAATAGTA ACGATGCATT AAGTTATAGC TTGGCCGGTG GAGAAACCGG | 650 |
AGGCTCAATG TATAATCATC AGACGTTATC TACTACAAAT TCTTCATCTT | 700 |
CTGGTGGATC TTCAAGGCAA CAAGATGATG AACAAGATTA CGCCAGATAT | 750 |
TTGCGTTTTG GGGATTCTTC ACCTCCTAAT TCTGGTTTTT GA | 800 |
>AT5G07310.1 longest ORF length:263
MANSGNYGKR PFRGDESDEK KEADDDENIF PFFSARSQYD MRAMVSALTQ | 50 |
VIGNQSSSHD NNQHQPVVYN QQDPNPPAPP TQDQGLLRKR HYRGVRQRPW | 100 |
GKWAAEIRDP QKAARVWLGT FETAEAAALA YDNAALKFKG SKAKLNFPER | 150 |
AQLASNTSTT TGPPNYYSSN NQIYYSNPQT NPQTIPYFNQ YYYNQYLHQG | 200 |
GNSNDALSYS LAGGETGGSM YNHQTLSTTN SSSSGGSSRQ QDDEQDYARY | 250 |
LRFGDSSPPN SGF | 300 |