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| Locus | Common name | Short description |
| AT5G07400 | forkhead-associated domain-containing protein / FHA domain-containing protein (.1) |
>AT5G07400.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, XbaI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 660 |
| HindIII | A|AGCTT | 3050 |
| PstI | CTGCA|G | 2441 |
| PvuII | CAG|CTG | 1639, 2438, 2798 |
| SacI | GAGCT|C | 2899 |
| SmaI | CCC|GGG | 1937 |
| SpeI | A|CTAGT | 2199 |
| StyI | C|C[AT][AT]GG | 2160 |
| XhoI | C|TCGAG | 539 |
Click here to view TAIR data
>AT5G07400.1 length:3255
ATGAAAAGGC GACAGTGTGA GAAAGTTGTG ATTCGTATCC ACAATATTGG | 50 |
CACACCATTG ATTTCTGGGT CTTCTGGTTT GCCTTTAGAG TTATTTCACA | 100 |
TTCAATCAGA TCGGCCGTAC ACGATTGGTC GAAGTAGTAG TGATGGGTTT | 150 |
TGCGATTTTG TTATTGATCA TAGCTCTATC AGTAGAAAAC ACTGTCAGAT | 200 |
TCTATTTGAT AGCCAAAGTC ACAAACTTTA TATTTTTGAC GGCGTGATTC | 250 |
ACTTGCCTTC CGGTAGTTTT AGTCAAGTTT ATGATGAGTT TAGGAGAAGA | 300 |
TTAGTTGGTG TTGAGGATTT GGGGAATTTG AAGTTTAGGG CTTCTTTGAA | 350 |
TGGGGTTTAT GTAAATCGTG TTAGAGTTAG GAAATCTAAA GTTCAGGAGG | 400 |
TTTCTATAGA TGATGAGGTA TTGTTTTTTT GCGGGAAGGA AGGGTTGTGT | 450 |
TGTAAAGATG GTCGAGTTGG GTTTGTGGTT CAGGAGATTG TGTTTGAAGG | 500 |
AAGAGATGCT TCGATTGTAT CGGTCTCTTC AGGACATTCT CGAGGAACCT | 550 |
TTTCAAGTGG GAAGAGAAGC AAAAGGGTTT TTGCTCCGAT GGAAAACGAG | 600 |
ATTAATTCTC CAGTTTCTGG GTTTTATCCA CCTAAAGCTG TTGGTGTTGT | 650 |
TGAGAGAGTG AATTCTCTTG TAAGCTATTG TAGACATATA TTGAAGAGTG | 700 |
ATGATCCTCT ATCTTGCCTT AGGCTATCTA TTATATCACA TTCTGGAAAG | 750 |
GAATGTCTAT CTTGTTGTAC ATCCAAAATG TTTAGGTCAA AAGTAGGTAT | 800 |
AGTGGCCGAT GATAGAGGAG TTAAGAGTGC CGAGATAAAT CATGATATGG | 850 |
GTCATGGTTT GTCTGGTCTA AGGTTGAGTA TTGAACGGCC AAACTCAAAT | 900 |
TTACATGTAG ATAGAAGACT AGGTGTCTCT GACTTGATTA GCGAAATAGA | 950 |
AAACGAGTTT GCTGCTTGTA CTTTTATCAG TGATAAGACT AGGACTATGC | 1000 |
TTCCTTTTGA TGGGGAGAAA GTTAATACTC CCGATATTAC TTGCATCAAT | 1050 |
AAAGAGAAAA GTTATCAAAG TTCTCTCCAA GCACCTGGGA AGAACTTTTA | 1100 |
TCTAAATCGT CTACAGTATA TTGAACAAAG CTCAACTGGT TGTCAACGGG | 1150 |
TGGTTTCCTT GCCAGAACTT CTTCACCCTG TGGAAAGCAT TCAACAAATC | 1200 |
TTTCTTGCAA CATTTACAAG TGATATTTTA TGGTTTCTTA CCTGTTGTGA | 1250 |
TACACCTAGA CACTTGCCTG TGACTATCGC ATGTCACAAT GCTGAGAGAT | 1300 |
GTTGGAGTTC AAACCCTGAT GCAAGAACTG CTGTGCCTTT GCCAAATTAC | 1350 |
CCAAATGTGA CTATGGTGTA TCCACCATTT CCTGAGGAAA TTGCATTTGG | 1400 |
GAAGGACCGC ACGAACCGTG GCATTGCTTG TCATCACCCC AAGCTGTTTA | 1450 |
TTTTGCAAAG AAAAGATAGC ATTCGTGTAA TTATCACATC TGCAAACTTA | 1500 |
GTAGCAAGAC AGTGGAATGA CGTGACCAAC ACAGTTTGGT GGCAAGACTT | 1550 |
TCCACGAAGA GCAGACCCTG ATCTTTTATC CCTTTTCGGC CATTGCCAAA | 1600 |
GAGAAACCAA TCATGGTTTA AAGCCAGACT TTTGTGCTCA GCTGGCTGGA | 1650 |
TTTGCCGCAT CACTTTTGAC TGATGTTCCA AGTCAGGCCC ATTGGATTCT | 1700 |
TGAGTTCACG AAGTACAACT TTGAACACTC AGCAGGTCAC CTTGTTGCTT | 1750 |
CAGTGCCTGG AATCCATTCT TATAAGCCGT CTTATCTCAC AGAGTCTGGT | 1800 |
TGCTCAAATA CCATTTTCAG TGAAGAATTT CTGGGATCTG TTGAAGCATC | 1850 |
TGTTGTAGGT CTCAGTTACC TTTTCCGCTC TGCCAATGAT TCCACAGGAG | 1900 |
CACAACTGAA ACGACTGGCT TCATATATCC GCAGAACCCG GGAAAATTCT | 1950 |
CTCGGAATGT TAGAACTTGT TTTGAGAAGA AATACGAATG TGCCTGCTGA | 2000 |
CCCGAATGCT GTGAGAGTCC TTGTTCCTAA CCCAGATGAT GATTCAAGAG | 2050 |
ATGATTTTGT CCAACTAGGC TTTTTGCCAC GGAGTATTGC AAAATGGGTG | 2100 |
TCTCCTTTAT GGGATATTGG ATTCTTTAAA TTTGTGGGAT ATGTGTATCG | 2150 |
GGATGAAGTC CTTGGAGCTG CTTCTTGTAG GAGCAACGAG AAGGTGCAAC | 2200 |
TAGTGCTGCA TGTATTACAG GGAGTGTCCA TTTCAGATAT GTCAAAGTTG | 2250 |
ATTCAACCTT ATCATGTTGT TGCATTGTGC TCGTTGATTG CTTCACTTCA | 2300 |
GAGATGTACT GGCATTTGGA GGCTACAAGA GGTGTTAGGC CGTTACAAGT | 2350 |
GGCCCGAATC TCAGGAATCT GATTTCGTCT ACAGTGCATC CTCGATTGGA | 2400 |
GGCTCAGCAA CTACAGGATT TCAAGCTGAT TTTTCATCAG CTGCAGGTAA | 2450 |
AAAAGCGTTA CAGCATTTTG ACTCCCAGGA GTCTGATCCA GAGTGGGGAT | 2500 |
GCTGGAGTAA CAGGGAAGAA CGGGAAGCTC CTTCCATTAA AATAATCTTC | 2550 |
CCTACCATAG AAAGAGTCAA GAATGGCCAT CATGGTGTCT TGTCTTCAAG | 2600 |
ACGTTTGCTT TGCTTCTCTG AGAAAACCTG GCAAAAGTGG AGACATAGCA | 2650 |
ATGTGCTTCA CGATGCAGTT CCTAATCCTC AAGATAGAGT TGGACACCCA | 2700 |
ATGCATATCA AGGTGGCTAG GAGACTCTTT ACCTCCACGA GAGGTTCACG | 2750 |
ATCTTCTTCG TTTGGTTGGG TTTACAGCGG CTCACATAAT TTCAGTGCAG | 2800 |
CTGCCTGGGG ACAGACCATA TCCAGATCCT CCAGAAACAA CCAGGACCAG | 2850 |
TCAAACAATG CCATCAGAGC AGTTAAAAAA CTTCGTGTAT GTAACTATGA | 2900 |
GCTCGGGATT GTGTTCGTTT TCCCTCCACC TCATGAAGAA ACCGACTCAT | 2950 |
GCGAAGGGTC TAAAATTGAT GATATTGTCT TGCCTTTTGT TGTACCGGCT | 3000 |
CCAAAATATG GATGGAGTGA TAAACCGGCT ACAGGTTTGG CTATGAGGGA | 3050 |
AGCTTTTGCT GAGTTTAGGG AAGGCTCTAC AAGTTTCTGT GGAGAATCAG | 3100 |
AAGTTGAGGA AGAAGTAGAA GAAGAAGAGG AAGAAGAAGC TGATGCTGAA | 3150 |
GGAAGAGGAG AGTTTGTTGC AGAAGAGGAG AAGCAAGAGG AAGAGGCTTA | 3200 |
TGCTGAGGCC TTGTGGAGCC AGGTTGAGTC ATCCTCATCC TCCCTCAGCT | 3250 |
CCTGA | 3300 |
>AT5G07400.1 longest ORF length:1084
MKRRQCEKVV IRIHNIGTPL ISGSSGLPLE LFHIQSDRPY TIGRSSSDGF | 50 |
CDFVIDHSSI SRKHCQILFD SQSHKLYIFD GVIHLPSGSF SQVYDEFRRR | 100 |
LVGVEDLGNL KFRASLNGVY VNRVRVRKSK VQEVSIDDEV LFFCGKEGLC | 150 |
CKDGRVGFVV QEIVFEGRDA SIVSVSSGHS RGTFSSGKRS KRVFAPMENE | 200 |
INSPVSGFYP PKAVGVVERV NSLVSYCRHI LKSDDPLSCL RLSIISHSGK | 250 |
ECLSCCTSKM FRSKVGIVAD DRGVKSAEIN HDMGHGLSGL RLSIERPNSN | 300 |
LHVDRRLGVS DLISEIENEF AACTFISDKT RTMLPFDGEK VNTPDITCIN | 350 |
KEKSYQSSLQ APGKNFYLNR LQYIEQSSTG CQRVVSLPEL LHPVESIQQI | 400 |
FLATFTSDIL WFLTCCDTPR HLPVTIACHN AERCWSSNPD ARTAVPLPNY | 450 |
PNVTMVYPPF PEEIAFGKDR TNRGIACHHP KLFILQRKDS IRVIITSANL | 500 |
VARQWNDVTN TVWWQDFPRR ADPDLLSLFG HCQRETNHGL KPDFCAQLAG | 550 |
FAASLLTDVP SQAHWILEFT KYNFEHSAGH LVASVPGIHS YKPSYLTESG | 600 |
CSNTIFSEEF LGSVEASVVG LSYLFRSAND STGAQLKRLA SYIRRTRENS | 650 |
LGMLELVLRR NTNVPADPNA VRVLVPNPDD DSRDDFVQLG FLPRSIAKWV | 700 |
SPLWDIGFFK FVGYVYRDEV LGAASCRSNE KVQLVLHVLQ GVSISDMSKL | 750 |
IQPYHVVALC SLIASLQRCT GIWRLQEVLG RYKWPESQES DFVYSASSIG | 800 |
GSATTGFQAD FSSAAGKKAL QHFDSQESDP EWGCWSNREE REAPSIKIIF | 850 |
PTIERVKNGH HGVLSSRRLL CFSEKTWQKW RHSNVLHDAV PNPQDRVGHP | 900 |
MHIKVARRLF TSTRGSRSSS FGWVYSGSHN FSAAAWGQTI SRSSRNNQDQ | 950 |
SNNAIRAVKK LRVCNYELGI VFVFPPPHEE TDSCEGSKID DIVLPFVVPA | 1000 |
PKYGWSDKPA TGLAMREAFA EFREGSTSFC GESEVEEEVE EEEEEEADAE | 1050 |
GRGEFVAEEE KQEEEAYAEA LWSQVESSSS SLSS | 1100 |