fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G07500 PEI1 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT5G07500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 337
EcoRV GAT|ATC 34


Click here to view TAIR data

>AT5G07500.1 length:738
ATGTTGAAAA GTGCAAGTCC AATGGCATTC TACGATATCG GAGAGCAGCA 
50
ATACTCTACT TTCGGGTACA TTTTAAGCAA ACCTGGGAAC GCAGGAGCTT 
100
ACGAGATTGA CCCTTCGATC CCAAACATCG ACGATGCGAT CTACGGCTCA 
150
GATGAGTTCC GTATGTACGC TTACAAAATC AAACGGTGTC CTCGTACTCG 
200
TAGCCACGAC TGGACGGAGT GTCCCTACGC TCACCGTGGC GAGAAAGCCA 
250
CACGCCGTGA TCCTCGCCGT TACACTTACT GTGCAGTCGC ATGCCCGGCT 
300
TTCCGAAATG GCGCATGCCA CCGTGGCGAC TCATGCGAAT TCGCACATGG 
350
CGTATTCGAG TACTGGCTCC ACCCGGCGCG TTACCGAACA CGCGCATGTA 
400
ACGCCGGGAA CTTGTGTCAG AGGAAAGTGT GTTTCTTTGC CCACGCGCCG 
450
GAGCAGCTAA GGCAGTCTGA AGGAAAGCAC AGGTGCAGGT ACGCATATAG 
500
GCCGGTGAGG GCTAGAGGTG GTGGAAACGG CGATGGAGTG ACGATGAGAA 
550
TGGACGACGA GGGTTACGAC ACGTCACGGT CTCCGGTGAG AAGCGGGAAA 
600
GATGATTTAG ATAGTAACGA GGAGAAGGTG TTGTTGAAGT GTTGGAGTCG 
650
GATGAGCATT GTGGATGATC ATTATGAGCC GTCCGATTTG GATTTGGATT 
700
TGTCACACTT TGATTGGATC TCAGAGTTGG TCGATTAA
750

>AT5G07500.1 longest ORF length:245
MLKSASPMAF YDIGEQQYST FGYILSKPGN AGAYEIDPSI PNIDDAIYGS 
50
DEFRMYAYKI KRCPRTRSHD WTECPYAHRG EKATRRDPRR YTYCAVACPA 
100
FRNGACHRGD SCEFAHGVFE YWLHPARYRT RACNAGNLCQ RKVCFFAHAP 
150
EQLRQSEGKH RCRYAYRPVR ARGGGNGDGV TMRMDDEGYD TSRSPVRSGK 
200
DDLDSNEEKV LLKCWSRMSI VDDHYEPSDL DLDLSHFDWI SELVD
250