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| Locus | Common name | Short description |
| AT5G07580 | Integrase-type DNA-binding superfamily protein (.1) |
>AT5G07580.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AciI, AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NgoMIV, NheI, NlaIV, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccIII(BspMII) | T|CCGGA | 378 |
| AflIII | A|CPuPyGT | 339 |
| AluI | AG|CT | 41, 152, 218, 232, 441, 658, 666, 721, 771 |
| ApoI | Pu|AATTPy | 447, 559, 732 |
| BclI | T|GATCA | 474 |
| BfaI | C|TAG | 519, 608 |
| BsaHI | GPu|CGPyC | 706 |
| BsaJI | C|CNNGG | 70, 531, 550, 672 |
| BsaWI | [AT]|CCGG[AT] | 378 |
| BsiHKAI | G[AT]GC[AT]|C | 688 |
| BslI | CCNNNNN|NNGG | 70 |
| Bsp1286I | G[GAT]GC[CAT]|C | 688 |
| BspEI | T|CCGGA | 378 |
| BssKI | |CCNGG | 671, 709 |
| BstBI | TT|CGAA | 502 |
| BstYI | Pu|GATCPy | 579 |
| BtgI | C|CPuPyGG | 70, 550 |
| DdeI | C|TNAG | 21, 251, 314, 784 |
| DpnI | GA-CH3|TC | 374, 473, 578, 594 |
| DpnII | |GATC | 374, 473, 578, 594 |
| EcoRI | G|AATTC | 447, 732 |
| Fnu4HI | GC|NGC | 74, 564, 636, 657 |
| HaeIII | GG|CC | 546 |
| HincII | GTPy|PuAC | 391 |
| HinfI | G|ANTC | 178, 360, 381, 417, 572, 601 |
| HpaII | C|CGG | 377, 670, 708 |
| Hpy188I | TCN|GA | 222, 476, 785 |
| HpyCH4III | ACN|GT | 652 |
| HpyCH4IV | A|CGT | 339 |
| HpyCH4V | TG|CA | 173, 402, 562, 637, 655, 762, 814 |
| MboI | |GATC | 374, 473, 578, 594 |
| MspI | C|CGG | 377, 670, 708 |
| MwoI | GCNNNNN|NNGC | 642, 770 |
| NciI | CC|[CG]GG | 671, 709 |
| NcoI | C|CATGG | 70 |
| NdeI | CA|TATG | 464 |
| NlaIII | CATG| | 69, 280, 764 |
| NsiI | ATGCA|T | 815 |
| Sau3AI | |GATC | 374, 473, 578, 594 |
| ScrFI | CC|NGG | 671, 709 |
| StyI | C|C[AT][AT]GG | 70 |
| Taqƒ¿I | T|CGA | 297, 501, 574 |
| TfiI | G|A[AT]TC | 178, 360, 381, 417, 572, 601 |
| TseI | G|C[AT]GC | 74, 564, 636, 657 |
| Tsp509I | |AATT | 446, 558, 731, 791 |
| XmnI | GAANN|NNTTC | 773 |
Click here to view TAIR data
>AT5G07580.1 length:825
ATGACCCCAT CTCTAAAACC ACTAAGAGAG CGACAAAACC ATAGCTTTTT | 50 |
TTTTGTGTCC CTACCCCATC CATGGCTGCT AAAATCTTGT GATTACCTTC | 100 |
TTGTCTCCTT CCTCTTCTCT TTCCCTCTTT TATATAAGAA CCAAAACATC | 150 |
CACAGCTTTT GTTCCATCAT CACTTGCAGA TTCTTTCTCT CTTTCGTAAA | 200 |
AATGGCGAGT TTTGAGGAAA GCTCTGATTT GGAAGCTATA CAGAGCCATC | 250 |
TCTTAGAAGA CTTGTTGGTT TGTGATGGTT TCATGGGAGA TTTTGACTTC | 300 |
GATGCTTCTT TTGTCTCAGG ACTTTGGTGT ATAGAACCAC ACGTTCCTAA | 350 |
ACAAGAACCT GATTCTCCAG TTCTTGATCC GGATTCTTTC GTCAACGAGT | 400 |
TCTTGCAAGT GGAAGGGGAA TCATCATCAT CATCATCACC AGAGCTGAAT | 450 |
TCATCGTCAT CAACATATGA GACTGATCAG AGTGTGAAAA AGGCAGAGAG | 500 |
GTTCGAAGAA GAAGTAGATG CTAGACATTA CCGAGGAGTG AGGCGAAGGC | 550 |
CGTGGGGGAA ATTTGCAGCA GAGATTCGAG ATCCAGCAAA GAAAGGATCA | 600 |
AGAATCTGGC TAGGAACATT TGAGAGTGAT GTTGATGCTG CAAGAGCCTA | 650 |
TGACTGTGCA GCTTTCAAGC TCCGGGGAAG AAAAGCCGTG CTCAACTTCC | 700 |
CTCTTGACGC CGGGAAATAT GAAGCTCCAG CGAATTCAGG AAGGAAAAGG | 750 |
AAGAGAAGTG ATGTGCATGA AGAGCTTCAA AGAACTCAGA GCAATTCATC | 800 |
TTCATCTTCC TGTGATGCAT TTTAG | 850 |
>AT5G07580.1 longest ORF length:274
MTPSLKPLRE RQNHSFFFVS LPHPWLLKSC DYLLVSFLFS FPLLYKNQNI | 50 |
HSFCSIITCR FFLSFVKMAS FEESSDLEAI QSHLLEDLLV CDGFMGDFDF | 100 |
DASFVSGLWC IEPHVPKQEP DSPVLDPDSF VNEFLQVEGE SSSSSSPELN | 150 |
SSSSTYETDQ SVKKAERFEE EVDARHYRGV RRRPWGKFAA EIRDPAKKGS | 200 |
RIWLGTFESD VDAARAYDCA AFKLRGRKAV LNFPLDAGKY EAPANSGRKR | 250 |
KRSDVHEELQ RTQSNSSSSS CDAF | 300 |