Locus |
Common name |
Short description |
AT5G07680 |
ANAC079, ATNAC4, ANAC080 |
Arabidopsis NAC domain containing protein 79, NAC domain containing protein 80 (.1.2) |
>AT5G07680.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, PvuII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
459 |
AluI
| AG|CT |
139, 166, 376, 649, 698 |
ApoI
| Pu|AATTPy |
904 |
AvaII
| G|G[AT]CC |
954 |
BanII
| GPuGCPy|C |
377 |
BclI
| T|GATCA |
924 |
BfaI
| C|TAG |
422, 564, 657 |
BglII
| A|GATCT |
317 |
BlpI
| GC|TNAGC |
170 |
BsaAI
| PyAC|GTPu |
628 |
BsaJI
| C|CNNGG |
123, 175, 324, 869 |
BsaWI
| [AT]|CCGG[AT] |
777, 952 |
BsiHKAI
| G[AT]GC[AT]|C |
377 |
BslI
| CCNNNNN|NNGG |
110, 289, 951 |
Bsp1286I
| G[GAT]GC[CAT]|C |
377, 631 |
BsrFI
| Pu|CCGGPy |
283 |
BsrI
| ACTGGN| |
253 |
BssKI
| |CCNGG |
54, 559, 868 |
BstBI
| TT|CGAA |
876 |
BstNI
| CC|[AT]GG |
54 |
BstYI
| Pu|GATCPy |
317, 518 |
BtgI
| C|CPuPyGG |
175 |
Cfr10I
| [AG]|CCGG[TC] |
283 |
DdeI
| C|TNAG |
169, 258, 463, 696 |
DpnI
| GA-CH3|TC |
316, 478, 517, 923, 962 |
DpnII
| |GATC |
316, 478, 517, 923, 962 |
HaeIII
| GG|CC |
386 |
HinfI
| G|ANTC |
541, 585, 728 |
HpaII
| C|CGG |
282, 558, 776, 867, 951, 956 |
Hpy188I
| TCN|GA |
248, 257, 322, 538, 762 |
Hpy99I
| CG[AT]CG| |
529 |
HpyCH4IV
| A|CGT |
530, 627 |
HpyCH4V
| TG|CA |
408, 482 |
MboI
| |GATC |
316, 478, 517, 923, 962 |
MfeI
| C|AATTG |
675 |
MseI
| T|TAA |
533, 578 |
MspI
| C|CGG |
282, 558, 776, 867, 951, 956 |
MwoI
| GCNNNNN|NNGC |
279 |
NciI
| CC|[CG]GG |
559, 868 |
NcoI
| C|CATGG |
175 |
NlaIII
| CATG| |
174, 410 |
NlaIV
| GGN|NCC |
556 |
NsiI
| ATGCA|T |
409 |
PspGI
| |CC[AT]GG |
54 |
PstI
| CTGCA|G |
483 |
RsaI
| GT|AC |
217 |
RsrII
| CG|G[AT]CCG |
955 |
SacI
| GAGCT|C |
377 |
Sau3AI
| |GATC |
316, 478, 517, 923, 962 |
Sau96I
| G|GNCC |
954 |
ScrFI
| CC|NGG |
54, 559, 868 |
SfcI
| C|TPuPyAG |
366, 483 |
SmlI
| C|TPyPuAG |
278 |
StyI
| C|C[AT][AT]GG |
123, 175 |
Taqƒ¿I
| T|CGA |
527, 875 |
TfiI
| G|A[AT]TC |
541, 585, 728 |
Tsp509I
| |AATT |
199, 398, 674, 903, 980 |
XmnI
| GAANN|NNTTC |
546 |
Click here to view TAIR data
>AT5G07680.1 length:990
ATGGAAACTT TCGGTGTGTT TCACAAGGAA GATGATGAGC AGATGGATTT | 50 |
GCCTCCTGGT TTTAGGTTTC ATCCAACAGA CGAAGAACTC ATAACCCACT | 100 |
ATCTCCACAA GAAGGTTCTT GACCTTGGTT TCTCGGCTAA AGCTATTGGT | 150 |
GAGGTTGATT TGAACAAAGC TGAGCCATGG GAGTTGCCAT ATAAAGCAAA | 200 |
AATTGGTGAG AAAGAATGGT ACTTTTTCTG TGTGAGGGAT AGAAAGTATC | 250 |
CGACTGGTCT GAGGACTAAC CGAGCAACTC AAGCCGGTTA TTGGAAGGCG | 300 |
ACAGGGAAGG ATAAAGAGAT CTTCCGAGGC AAATCGCTTG TTGGTATGAA | 350 |
GAAAACACTT GTTTTCTACA GAGGAAGAGC TCCTAAAGGC CAGAAAACAA | 400 |
ATTGGGTGAT GCATGAGTAT AGGCTAGATG GAAAACTCTC TGCTCACAAC | 450 |
TTGCCTAAAA CCGCTAAGAA TGAATGGGTG ATCTGCAGGG TATTTCATAA | 500 |
AACTGCTGGA GGTAAGAAGA TCCCGATTTC GACGTTAATC CGAATCGGTT | 550 |
CTTACGGAAC CGGGTCTAGT TTACCACCTT TAACTGATTC TTCACCATAC | 600 |
AACGACAAAA CCAAGACCGA ACCAGTTTAC GTGCCCTGCT TCTCCAACCA | 650 |
AGCTGAAACT AGAGGAACAA TACTCAATTG CTTCAGCAAC CCTTCCCTTA | 700 |
GCTCCATCCA ACCAGATTTT CTCCAGATGA TTCCACTCTA CCAACCTCAA | 750 |
TCTCTCAACA TTTCCGAGAG TTCCAATCCG GTTCTTACGC AAGAACAATC | 800 |
AGTTTTACAA GCGATGATGG AAAACAACAG AAGGCAGAAC TTCAAAACAT | 850 |
TGAGCATCTC GCAAGAAACC GGGGTTTCGA ACACCGATAA CTCATCGGTT | 900 |
TTTGAATTTG GGAGGAAGCG ATTTGATCAT CAAGAAGTTC CATCTCCCTC | 950 |
TTCCGGTCCG GTTGATCTTG AACCTTTCTG GAATTACTGA | 1000 |
>AT5G07680.1 longest ORF length:329
METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG | 50 |
EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA | 100 |
TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN | 150 |
LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY | 200 |
NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ | 250 |
SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV | 300 |
FEFGRKRFDH QEVPSPSSGP VDLEPFWNY | 350 |
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