Locus |
Common name |
Short description |
AT5G07680 |
ANAC079, ATNAC4, ANAC080 |
Arabidopsis NAC domain containing protein 79, NAC domain containing protein 80 (.1.2) |
>AT5G07680.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
317 |
NcoI
| C|CATGG |
175 |
PstI
| CTGCA|G |
483 |
SacI
| GAGCT|C |
377 |
StyI
| C|C[AT][AT]GG |
123, 175 |
Click here to view TAIR data
>AT5G07680.1 length:990
ATGGAAACTT TCGGTGTGTT TCACAAGGAA GATGATGAGC AGATGGATTT | 50 |
GCCTCCTGGT TTTAGGTTTC ATCCAACAGA CGAAGAACTC ATAACCCACT | 100 |
ATCTCCACAA GAAGGTTCTT GACCTTGGTT TCTCGGCTAA AGCTATTGGT | 150 |
GAGGTTGATT TGAACAAAGC TGAGCCATGG GAGTTGCCAT ATAAAGCAAA | 200 |
AATTGGTGAG AAAGAATGGT ACTTTTTCTG TGTGAGGGAT AGAAAGTATC | 250 |
CGACTGGTCT GAGGACTAAC CGAGCAACTC AAGCCGGTTA TTGGAAGGCG | 300 |
ACAGGGAAGG ATAAAGAGAT CTTCCGAGGC AAATCGCTTG TTGGTATGAA | 350 |
GAAAACACTT GTTTTCTACA GAGGAAGAGC TCCTAAAGGC CAGAAAACAA | 400 |
ATTGGGTGAT GCATGAGTAT AGGCTAGATG GAAAACTCTC TGCTCACAAC | 450 |
TTGCCTAAAA CCGCTAAGAA TGAATGGGTG ATCTGCAGGG TATTTCATAA | 500 |
AACTGCTGGA GGTAAGAAGA TCCCGATTTC GACGTTAATC CGAATCGGTT | 550 |
CTTACGGAAC CGGGTCTAGT TTACCACCTT TAACTGATTC TTCACCATAC | 600 |
AACGACAAAA CCAAGACCGA ACCAGTTTAC GTGCCCTGCT TCTCCAACCA | 650 |
AGCTGAAACT AGAGGAACAA TACTCAATTG CTTCAGCAAC CCTTCCCTTA | 700 |
GCTCCATCCA ACCAGATTTT CTCCAGATGA TTCCACTCTA CCAACCTCAA | 750 |
TCTCTCAACA TTTCCGAGAG TTCCAATCCG GTTCTTACGC AAGAACAATC | 800 |
AGTTTTACAA GCGATGATGG AAAACAACAG AAGGCAGAAC TTCAAAACAT | 850 |
TGAGCATCTC GCAAGAAACC GGGGTTTCGA ACACCGATAA CTCATCGGTT | 900 |
TTTGAATTTG GGAGGAAGCG ATTTGATCAT CAAGAAGTTC CATCTCCCTC | 950 |
TTCCGGTCCG GTTGATCTTG AACCTTTCTG GAATTACTGA | 1000 |
>AT5G07680.1 longest ORF length:329
METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG | 50 |
EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA | 100 |
TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN | 150 |
LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY | 200 |
NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ | 250 |
SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV | 300 |
FEFGRKRFDH QEVPSPSSGP VDLEPFWNY | 350 |
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