fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G07680 ANAC079, ATNAC4, ANAC080 Arabidopsis NAC domain containing protein 79, NAC domain containing protein 80 (.1.2)

>AT5G07680.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 317
NcoI C|CATGG 175
PstI CTGCA|G 483
SacI GAGCT|C 377
StyI C|C[AT][AT]GG 123, 175


Click here to view TAIR data

>AT5G07680.1 length:990
ATGGAAACTT TCGGTGTGTT TCACAAGGAA GATGATGAGC AGATGGATTT 
50
GCCTCCTGGT TTTAGGTTTC ATCCAACAGA CGAAGAACTC ATAACCCACT 
100
ATCTCCACAA GAAGGTTCTT GACCTTGGTT TCTCGGCTAA AGCTATTGGT 
150
GAGGTTGATT TGAACAAAGC TGAGCCATGG GAGTTGCCAT ATAAAGCAAA 
200
AATTGGTGAG AAAGAATGGT ACTTTTTCTG TGTGAGGGAT AGAAAGTATC 
250
CGACTGGTCT GAGGACTAAC CGAGCAACTC AAGCCGGTTA TTGGAAGGCG 
300
ACAGGGAAGG ATAAAGAGAT CTTCCGAGGC AAATCGCTTG TTGGTATGAA 
350
GAAAACACTT GTTTTCTACA GAGGAAGAGC TCCTAAAGGC CAGAAAACAA 
400
ATTGGGTGAT GCATGAGTAT AGGCTAGATG GAAAACTCTC TGCTCACAAC 
450
TTGCCTAAAA CCGCTAAGAA TGAATGGGTG ATCTGCAGGG TATTTCATAA 
500
AACTGCTGGA GGTAAGAAGA TCCCGATTTC GACGTTAATC CGAATCGGTT 
550
CTTACGGAAC CGGGTCTAGT TTACCACCTT TAACTGATTC TTCACCATAC 
600
AACGACAAAA CCAAGACCGA ACCAGTTTAC GTGCCCTGCT TCTCCAACCA 
650
AGCTGAAACT AGAGGAACAA TACTCAATTG CTTCAGCAAC CCTTCCCTTA 
700
GCTCCATCCA ACCAGATTTT CTCCAGATGA TTCCACTCTA CCAACCTCAA 
750
TCTCTCAACA TTTCCGAGAG TTCCAATCCG GTTCTTACGC AAGAACAATC 
800
AGTTTTACAA GCGATGATGG AAAACAACAG AAGGCAGAAC TTCAAAACAT 
850
TGAGCATCTC GCAAGAAACC GGGGTTTCGA ACACCGATAA CTCATCGGTT 
900
TTTGAATTTG GGAGGAAGCG ATTTGATCAT CAAGAAGTTC CATCTCCCTC 
950
TTCCGGTCCG GTTGATCTTG AACCTTTCTG GAATTACTGA 
1000

>AT5G07680.1 longest ORF length:329
METFGVFHKE DDEQMDLPPG FRFHPTDEEL ITHYLHKKVL DLGFSAKAIG 
50
EVDLNKAEPW ELPYKAKIGE KEWYFFCVRD RKYPTGLRTN RATQAGYWKA 
100
TGKDKEIFRG KSLVGMKKTL VFYRGRAPKG QKTNWVMHEY RLDGKLSAHN 
150
LPKTAKNEWV ICRVFHKTAG GKKIPISTLI RIGSYGTGSS LPPLTDSSPY 
200
NDKTKTEPVY VPCFSNQAET RGTILNCFSN PSLSSIQPDF LQMIPLYQPQ 
250
SLNISESSNP VLTQEQSVLQ AMMENNRRQN FKTLSISQET GVSNTDNSSV 
300
FEFGRKRFDH QEVPSPSSGP VDLEPFWNY
350