Locus |
Common name |
Short description |
AT5G07680 |
ANAC079, ATNAC4, ANAC080 |
Arabidopsis NAC domain containing protein 79, NAC domain containing protein 80 (.1.2) |
>AT5G07680.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, PvuII, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AciI
| C|CGC |
417 |
AluI
| AG|CT |
97, 124, 334, 607, 656 |
ApoI
| Pu|AATTPy |
862 |
AvaII
| G|G[AT]CC |
912 |
BanII
| GPuGCPy|C |
335 |
BclI
| T|GATCA |
882 |
BfaI
| C|TAG |
380, 522, 615 |
BglII
| A|GATCT |
275 |
BlpI
| GC|TNAGC |
128 |
BsaAI
| PyAC|GTPu |
586 |
BsaJI
| C|CNNGG |
81, 133, 282, 827 |
BsaWI
| [AT]|CCGG[AT] |
735, 910 |
BsiHKAI
| G[AT]GC[AT]|C |
335 |
BslI
| CCNNNNN|NNGG |
68, 247, 909 |
Bsp1286I
| G[GAT]GC[CAT]|C |
335, 589 |
BsrFI
| Pu|CCGGPy |
241 |
BsrI
| ACTGGN| |
211 |
BssKI
| |CCNGG |
12, 517, 826 |
BstBI
| TT|CGAA |
834 |
BstNI
| CC|[AT]GG |
12 |
BstYI
| Pu|GATCPy |
275, 476 |
BtgI
| C|CPuPyGG |
133 |
Cfr10I
| [AG]|CCGG[TC] |
241 |
DdeI
| C|TNAG |
127, 216, 421, 654 |
DpnI
| GA-CH3|TC |
274, 436, 475, 881, 920 |
DpnII
| |GATC |
274, 436, 475, 881, 920 |
HaeIII
| GG|CC |
344 |
HinfI
| G|ANTC |
499, 543, 686 |
HpaII
| C|CGG |
240, 516, 734, 825, 909, 914 |
Hpy188I
| TCN|GA |
206, 215, 280, 496, 720 |
Hpy99I
| CG[AT]CG| |
487 |
HpyCH4IV
| A|CGT |
488, 585 |
HpyCH4V
| TG|CA |
366, 440 |
MboI
| |GATC |
274, 436, 475, 881, 920 |
MfeI
| C|AATTG |
633 |
MseI
| T|TAA |
491, 536 |
MspI
| C|CGG |
240, 516, 734, 825, 909, 914 |
MwoI
| GCNNNNN|NNGC |
237 |
NciI
| CC|[CG]GG |
517, 826 |
NcoI
| C|CATGG |
133 |
NlaIII
| CATG| |
132, 368 |
NlaIV
| GGN|NCC |
514 |
NsiI
| ATGCA|T |
367 |
PspGI
| |CC[AT]GG |
12 |
PstI
| CTGCA|G |
441 |
RsaI
| GT|AC |
175 |
RsrII
| CG|G[AT]CCG |
913 |
SacI
| GAGCT|C |
335 |
Sau3AI
| |GATC |
274, 436, 475, 881, 920 |
Sau96I
| G|GNCC |
912 |
ScrFI
| CC|NGG |
12, 517, 826 |
SfcI
| C|TPuPyAG |
324, 441 |
SmlI
| C|TPyPuAG |
236 |
StyI
| C|C[AT][AT]GG |
81, 133 |
Taqƒ¿I
| T|CGA |
485, 833 |
TfiI
| G|A[AT]TC |
499, 543, 686 |
Tsp509I
| |AATT |
157, 356, 632, 861, 938 |
XmnI
| GAANN|NNTTC |
504 |
Click here to view TAIR data
>AT5G07680.2 length:948
ATGGATTTGC CTCCTGGTTT TAGGTTTCAT CCAACAGACG AAGAACTCAT | 50 |
AACCCACTAT CTCCACAAGA AGGTTCTTGA CCTTGGTTTC TCGGCTAAAG | 100 |
CTATTGGTGA GGTTGATTTG AACAAAGCTG AGCCATGGGA GTTGCCATAT | 150 |
AAAGCAAAAA TTGGTGAGAA AGAATGGTAC TTTTTCTGTG TGAGGGATAG | 200 |
AAAGTATCCG ACTGGTCTGA GGACTAACCG AGCAACTCAA GCCGGTTATT | 250 |
GGAAGGCGAC AGGGAAGGAT AAAGAGATCT TCCGAGGCAA ATCGCTTGTT | 300 |
GGTATGAAGA AAACACTTGT TTTCTACAGA GGAAGAGCTC CTAAAGGCCA | 350 |
GAAAACAAAT TGGGTGATGC ATGAGTATAG GCTAGATGGA AAACTCTCTG | 400 |
CTCACAACTT GCCTAAAACC GCTAAGAATG AATGGGTGAT CTGCAGGGTA | 450 |
TTTCATAAAA CTGCTGGAGG TAAGAAGATC CCGATTTCGA CGTTAATCCG | 500 |
AATCGGTTCT TACGGAACCG GGTCTAGTTT ACCACCTTTA ACTGATTCTT | 550 |
CACCATACAA CGACAAAACC AAGACCGAAC CAGTTTACGT GCCCTGCTTC | 600 |
TCCAACCAAG CTGAAACTAG AGGAACAATA CTCAATTGCT TCAGCAACCC | 650 |
TTCCCTTAGC TCCATCCAAC CAGATTTTCT CCAGATGATT CCACTCTACC | 700 |
AACCTCAATC TCTCAACATT TCCGAGAGTT CCAATCCGGT TCTTACGCAA | 750 |
GAACAATCAG TTTTACAAGC GATGATGGAA AACAACAGAA GGCAGAACTT | 800 |
CAAAACATTG AGCATCTCGC AAGAAACCGG GGTTTCGAAC ACCGATAACT | 850 |
CATCGGTTTT TGAATTTGGG AGGAAGCGAT TTGATCATCA AGAAGTTCCA | 900 |
TCTCCCTCTT CCGGTCCGGT TGATCTTGAA CCTTTCTGGA ATTACTGA | 950 |
>AT5G07680.2 longest ORF length:315
MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY | 50 |
KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV | 100 |
GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV | 150 |
FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF | 200 |
SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ | 250 |
EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP | 300 |
SPSSGPVDLE PFWNY | 350 |
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