fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G07680 ANAC079, ATNAC4, ANAC080 Arabidopsis NAC domain containing protein 79, NAC domain containing protein 80 (.1.2)

>AT5G07680.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 275
NcoI C|CATGG 133
PstI CTGCA|G 441
SacI GAGCT|C 335
StyI C|C[AT][AT]GG 81, 133


Click here to view TAIR data

>AT5G07680.2 length:948
ATGGATTTGC CTCCTGGTTT TAGGTTTCAT CCAACAGACG AAGAACTCAT 
50
AACCCACTAT CTCCACAAGA AGGTTCTTGA CCTTGGTTTC TCGGCTAAAG 
100
CTATTGGTGA GGTTGATTTG AACAAAGCTG AGCCATGGGA GTTGCCATAT 
150
AAAGCAAAAA TTGGTGAGAA AGAATGGTAC TTTTTCTGTG TGAGGGATAG 
200
AAAGTATCCG ACTGGTCTGA GGACTAACCG AGCAACTCAA GCCGGTTATT 
250
GGAAGGCGAC AGGGAAGGAT AAAGAGATCT TCCGAGGCAA ATCGCTTGTT 
300
GGTATGAAGA AAACACTTGT TTTCTACAGA GGAAGAGCTC CTAAAGGCCA 
350
GAAAACAAAT TGGGTGATGC ATGAGTATAG GCTAGATGGA AAACTCTCTG 
400
CTCACAACTT GCCTAAAACC GCTAAGAATG AATGGGTGAT CTGCAGGGTA 
450
TTTCATAAAA CTGCTGGAGG TAAGAAGATC CCGATTTCGA CGTTAATCCG 
500
AATCGGTTCT TACGGAACCG GGTCTAGTTT ACCACCTTTA ACTGATTCTT 
550
CACCATACAA CGACAAAACC AAGACCGAAC CAGTTTACGT GCCCTGCTTC 
600
TCCAACCAAG CTGAAACTAG AGGAACAATA CTCAATTGCT TCAGCAACCC 
650
TTCCCTTAGC TCCATCCAAC CAGATTTTCT CCAGATGATT CCACTCTACC 
700
AACCTCAATC TCTCAACATT TCCGAGAGTT CCAATCCGGT TCTTACGCAA 
750
GAACAATCAG TTTTACAAGC GATGATGGAA AACAACAGAA GGCAGAACTT 
800
CAAAACATTG AGCATCTCGC AAGAAACCGG GGTTTCGAAC ACCGATAACT 
850
CATCGGTTTT TGAATTTGGG AGGAAGCGAT TTGATCATCA AGAAGTTCCA 
900
TCTCCCTCTT CCGGTCCGGT TGATCTTGAA CCTTTCTGGA ATTACTGA
950

>AT5G07680.2 longest ORF length:315
MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY 
50
KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV 
100
GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV 
150
FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF 
200
SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ 
250
EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP 
300
SPSSGPVDLE PFWNY
350