Locus |
Common name |
Short description |
AT5G07680 |
ANAC079, ATNAC4, ANAC080 |
Arabidopsis NAC domain containing protein 79, NAC domain containing protein 80 (.1.2) |
>AT5G07680.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
275 |
NcoI
| C|CATGG |
133 |
PstI
| CTGCA|G |
441 |
SacI
| GAGCT|C |
335 |
StyI
| C|C[AT][AT]GG |
81, 133 |
Click here to view TAIR data
>AT5G07680.2 length:948
ATGGATTTGC CTCCTGGTTT TAGGTTTCAT CCAACAGACG AAGAACTCAT | 50 |
AACCCACTAT CTCCACAAGA AGGTTCTTGA CCTTGGTTTC TCGGCTAAAG | 100 |
CTATTGGTGA GGTTGATTTG AACAAAGCTG AGCCATGGGA GTTGCCATAT | 150 |
AAAGCAAAAA TTGGTGAGAA AGAATGGTAC TTTTTCTGTG TGAGGGATAG | 200 |
AAAGTATCCG ACTGGTCTGA GGACTAACCG AGCAACTCAA GCCGGTTATT | 250 |
GGAAGGCGAC AGGGAAGGAT AAAGAGATCT TCCGAGGCAA ATCGCTTGTT | 300 |
GGTATGAAGA AAACACTTGT TTTCTACAGA GGAAGAGCTC CTAAAGGCCA | 350 |
GAAAACAAAT TGGGTGATGC ATGAGTATAG GCTAGATGGA AAACTCTCTG | 400 |
CTCACAACTT GCCTAAAACC GCTAAGAATG AATGGGTGAT CTGCAGGGTA | 450 |
TTTCATAAAA CTGCTGGAGG TAAGAAGATC CCGATTTCGA CGTTAATCCG | 500 |
AATCGGTTCT TACGGAACCG GGTCTAGTTT ACCACCTTTA ACTGATTCTT | 550 |
CACCATACAA CGACAAAACC AAGACCGAAC CAGTTTACGT GCCCTGCTTC | 600 |
TCCAACCAAG CTGAAACTAG AGGAACAATA CTCAATTGCT TCAGCAACCC | 650 |
TTCCCTTAGC TCCATCCAAC CAGATTTTCT CCAGATGATT CCACTCTACC | 700 |
AACCTCAATC TCTCAACATT TCCGAGAGTT CCAATCCGGT TCTTACGCAA | 750 |
GAACAATCAG TTTTACAAGC GATGATGGAA AACAACAGAA GGCAGAACTT | 800 |
CAAAACATTG AGCATCTCGC AAGAAACCGG GGTTTCGAAC ACCGATAACT | 850 |
CATCGGTTTT TGAATTTGGG AGGAAGCGAT TTGATCATCA AGAAGTTCCA | 900 |
TCTCCCTCTT CCGGTCCGGT TGATCTTGAA CCTTTCTGGA ATTACTGA | 950 |
>AT5G07680.2 longest ORF length:315
MDLPPGFRFH PTDEELITHY LHKKVLDLGF SAKAIGEVDL NKAEPWELPY | 50 |
KAKIGEKEWY FFCVRDRKYP TGLRTNRATQ AGYWKATGKD KEIFRGKSLV | 100 |
GMKKTLVFYR GRAPKGQKTN WVMHEYRLDG KLSAHNLPKT AKNEWVICRV | 150 |
FHKTAGGKKI PISTLIRIGS YGTGSSLPPL TDSSPYNDKT KTEPVYVPCF | 200 |
SNQAETRGTI LNCFSNPSLS SIQPDFLQMI PLYQPQSLNI SESSNPVLTQ | 250 |
EQSVLQAMME NNRRQNFKTL SISQETGVSN TDNSSVFEFG RKRFDHQEVP | 300 |
SPSSGPVDLE PFWNY | 350 |
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