fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G07700 ATMYB76 myb domain protein 76 (.1)

>AT5G07700.1 CDS map

>>Show genomic map




Uncut enzymes: AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
ApaI GGGCC|C 859
BglII A|GATCT 685, 759, 870
EcoRV GAT|ATC 190
NdeI CA|TATG 731
SacI GAGCT|C 597


Click here to view TAIR data

>AT5G07700.1 length:1017
ATGTCAAAGA GACCATATTG TATCGGAGAA GGACTGAAGA AAGGAGCATG 
50
GACTACAGAA GAGGATAAAA AACTCATCTC TTATATCCAC GACCACGGTG 
100
AAGGAGGCTG GCGTGACATT CCAGAAAAAG CTGGGCTGAA ACGGTGTGGA 
150
AAGAGTTGTA GATTACGGTG GACTAACTAT TTGAAACCAG ATATCAAGAG 
200
AGGAGAGTTT AGCTATGAGG AAGAGCAGAT TATCATCATG CTTCATGCAT 
250
CTCGTGGCAA TAAGTGGTCT GTCATAGCTA GACATTTGCC AAAAAGAACG 
300
GATAACGAGG TCAAAAACTA TTGGAACACA CATCTCAAGA AACGTTTAAT 
350
CGATGATGGC ATTGATCCCG TGACACACAA GCCACTAGCT TCTTCTAACC 
400
CTAATCCAGT TGAGCCCATG AAGTTCGATT TCCAAAAGAA ATCCAATCAG 
450
GATGAGCACT CTTCACAGTC TAGTTCTACA ACTCCAGCAT CTCTTCCCCT 
500
TTCCTCGAAT TTGAACAGTG TTAAATCCAA AATTAGCAGT GGTGAGACGC 
550
AGATAGAAAG TGGTCACGTG AGCTGCAAGA AACGTTTTGG ACGATCGAGC 
600
TCTACATCAA GGTTGTTAAA CAAAGTTGCA GCTAGAGCTT CTTCCATCGG 
650
CAACATCTTA TCAACATCCA TAGAAGGAAC CTTGAGATCT CCTGCATCAT 
700
CTTCAGGACT CCCAGACTCG TTCTCTCAAT CATATGAGTA CATGATCGAT 
750
AACAAAGAAG ATCTCGGTAC GAGCATTGAT CTCAACATCC CCGAGTATGA 
800
TTTCCCACAG TTTCTTGAGC AACTCATTAA CGATGACGAC GAAAATGAGA 
850
ACATTGTTGG GCCCGAACAA GATCTCCTTA TGTCCGATTT CCCATCAACA 
900
TTCGTTGATG AAGACGATAT ACTTGGAGAC ATAACCAGTT GGTCAACTTA 
950
TCTTCTTGAC CATCCCAATT TTATGTATGA ATCGGATCAA GATTCCGACG 
1000
AGAAGAACTT CTTATGA
1050

>AT5G07700.1 longest ORF length:338
MSKRPYCIGE GLKKGAWTTE EDKKLISYIH DHGEGGWRDI PEKAGLKRCG 
50
KSCRLRWTNY LKPDIKRGEF SYEEEQIIIM LHASRGNKWS VIARHLPKRT 
100
DNEVKNYWNT HLKKRLIDDG IDPVTHKPLA SSNPNPVEPM KFDFQKKSNQ 
150
DEHSSQSSST TPASLPLSSN LNSVKSKISS GETQIESGHV SCKKRFGRSS 
200
STSRLLNKVA ARASSIGNIL STSIEGTLRS PASSSGLPDS FSQSYEYMID 
250
NKEDLGTSID LNIPEYDFPQ FLEQLINDDD ENENIVGPEQ DLLMSDFPST 
300
FVDEDDILGD ITSWSTYLLD HPNFMYESDQ DSDEKNFL
350