Locus |
Common name |
Short description |
AT5G08070 |
TCP17 |
TCP domain protein 17 (.1) |
>AT5G08070.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
456 |
HindIII
| A|AGCTT |
377, 475 |
KpnI
| GGTAC|C |
653 |
SmaI
| CCC|GGG |
343 |
StyI
| C|C[AT][AT]GG |
327, 525 |
Click here to view TAIR data
>AT5G08070.1 length:729
ATGGGAATAA AAAAAGAAGA TCAGAAAAGT TCCTTGTCCT TGTTGACGCA | 50 |
ACGATGGAAT AATCCGAGGA TCGTGCGAGT CTCCCGAGCA TTTGGAGGCA | 100 |
AAGATAGACA CAGCAAAGTG TGCACAGTTC GTGGTCTCCG AGACAGGAGG | 150 |
ATAAGGTTGT CGGTGATGAC AGCGATCCAA GTCTACGACC TTCAAGAACG | 200 |
ATTAGGGCTG AGTCAGCCTA GCAAAGTCAT TGATTGGCTC TTAGAAGTTG | 250 |
CCAAAAACGA CGTCGATTTG CTTCCTCCTT TGCAATTCCC ACCTGGTTTT | 300 |
CACCAACTTA ACCCTAATCT CACCGGCCTT GGAGAATCTT TTCCCGGGGT | 350 |
CTTCGATCTT GGAAGAACAC AGAGAGAAGC TTTGGATCTT GAGAAAAGGA | 400 |
AATGGGTTAA TCTTGATCAT GTGTTTGATC ACATCGATCA TCACAACCAT | 450 |
TTCTCGAATT CAATCCAGAG CAACAAGCTT TATTTCCCTA CAATTACTTC | 500 |
GTCTAGCAGC TCTTATCACT ACAACCTTGG ACATCTCCAA CAGTCACTAC | 550 |
TAGACCAATC TGGTAACGTC ACTGTCGCAT TTTCTAATAA CTATAATAAT | 600 |
AATAATCTCA ATCCTCCGGC GGCGGAAACT ATGAGTTCTC TATTCCCAAC | 650 |
AAGGTACCCT TCGTTTCTCG GTGGTGGTCA ACTTCAACTC TTTAGTAGCA | 700 |
CAAGCTCACA ACCAGACCAT ATCGAGTAG | 750 |
>AT5G08070.1 longest ORF length:242
MGIKKEDQKS SLSLLTQRWN NPRIVRVSRA FGGKDRHSKV CTVRGLRDRR | 50 |
IRLSVMTAIQ VYDLQERLGL SQPSKVIDWL LEVAKNDVDL LPPLQFPPGF | 100 |
HQLNPNLTGL GESFPGVFDL GRTQREALDL EKRKWVNLDH VFDHIDHHNH | 150 |
FSNSIQSNKL YFPTITSSSS SYHYNLGHLQ QSLLDQSGNV TVAFSNNYNN | 200 |
NNLNPPAAET MSSLFPTRYP SFLGGGQLQL FSSTSSQPDH IE | 250 |
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