Locus |
Common name |
Short description |
AT5G08190 |
NF-YB12 |
"nuclear factor Y, subunit B12", nuclear factor Y, subunit B12 (.1.2) |
>AT5G08190.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
3 |
BglII
| A|GATCT |
120 |
HindIII
| A|AGCTT |
230 |
XhoI
| C|TCGAG |
401 |
Click here to view TAIR data
>AT5G08190.1 length:492
ATGGATCCGA TGGATATAGT TGGAAAATCA AAGGAAGATG CTTCGCTTCC | 50 |
GAAAGCTACC ATGACGAAAA TTATAAAGGA GATGTTACCC GCAGATGTTC | 100 |
GTGTTGCTAG AGATGCTCAA GATCTATTGA TTGAGTGTTG TGTAGAGTTC | 150 |
ATAAATCTTA TATCGTCGGA GTCGAATGAA GTGTGTAACA AAGAGGATAA | 200 |
ACGAACAATA GCCCCTGAGC ACGTACTCAA AGCTTTACAG GTTCTTGGCT | 250 |
TTGGGGAATA CGTAGAAGAA GTTTATGCCG CGTATGAGCA ACATAAATAT | 300 |
GAAACCATGC AGGATTCGCA GAGAAGTGTG AAGATGAATA GCGGAGCAGA | 350 |
GATGACGGAA GAAGAGGCGG CAGCGGAACA ACAGAGGATG TTTGCAGAAG | 400 |
CTCGAGCAAG AATGAATGGA GGTGTTACAG TTCCTCAACC AGAGCAACTA | 450 |
GAAGAACCCC AACAACAACA ACAAACAAGT CTACAAAGCT AA | 500 |
>AT5G08190.1 longest ORF length:163
MDPMDIVGKS KEDASLPKAT MTKIIKEMLP ADVRVARDAQ DLLIECCVEF | 50 |
INLISSESNE VCNKEDKRTI APEHVLKALQ VLGFGEYVEE VYAAYEQHKY | 100 |
ETMQDSQRSV KMNSGAEMTE EEAAAEQQRM FAEARARMNG GVTVPQPEQL | 150 |
EEPQQQQQTS LQS | 200 |
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