Locus |
Common name |
Short description |
AT5G08520 |
|
Duplicated homeodomain-like superfamily protein (.1) |
>AT5G08520.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
PstI
| CTGCA|G |
116 |
SacI
| GAGCT|C |
65 |
SpeI
| A|CTAGT |
547 |
Click here to view TAIR data
>AT5G08520.1 length:897
ATGACGGTGG AGGAAGTTAG TGATGGTTCT GTGTGGAGTA GGGAGGATGA | 50 |
TATTGCCTTT GAGAGAGCTC TAGCCAATAA TACCGATGAA TCAGAGGAAC | 100 |
GGTGGGAGAA GATTGCTGCA GACGTTCCAG GCAAAAGTGT TGAACAGATT | 150 |
AAAGAACATT ACGAGCTTTT AGTTGAAGAT GTTACTAGGA TTGAATCAGG | 200 |
ATGTGTGCCT CTTCCTGCCT ATGGGTCTCC TGAAGGATCG AATGGCCATG | 250 |
CTGGTGATGA AGGAGCAAGT AGTAAGAAAG GAGGTAACAG TCATGCGGGA | 300 |
GAGTCTAACC AAGCAGGTAA ATCAAAGTCC GATCAAGAAC GACGAAAGGG | 350 |
TATCGCGTGG ACAGAAGATG AGCACAGGTT ATTTCTTCTT GGTTTGGATA | 400 |
AGTACGGGAA AGGTGATTGG CGTAGCATTT CTCGCAACTT TGTAGTAACA | 450 |
AGAACACCGA CCCAAGTTGC GAGCCATGCT CAAAAGTATT TCATTCGTCT | 500 |
AAATTCAATG AACAAAGACA GAAGGCGATC AAGCATTCAC GACATCACTA | 550 |
GTGTTGGCAA CGCAGATGTC TCAACGCCAC AAGGACCAAT CACTGGTCAG | 600 |
AACAACAGCA ATAACAACAA CAACAACAAC AACAACAACA GTTCTCCTGC | 650 |
TGTTGCTGGA GGAGGAAACA AATCAGCCAA GCAAGCCGTC TCTCAAGCAC | 700 |
CACCTGGACC TCCTATGTAT GGAACACCCG CCATAGGTCA GCCAGCAGTT | 750 |
GGAACACCAG TGAACCTCCC AGCTCCACCT CACATGGCTT ATGGAGTTCA | 800 |
TGCGGCTCCA GTCCCTGGCT CAGTGGTTCC TGGTGCAGCA ATGAACATTG | 850 |
GTCAAATGCC GTACACCATG CCGCGTACAC CAACGGCTCA TAGGTAA | 900 |
>AT5G08520.1 longest ORF length:298
MTVEEVSDGS VWSREDDIAF ERALANNTDE SEERWEKIAA DVPGKSVEQI | 50 |
KEHYELLVED VTRIESGCVP LPAYGSPEGS NGHAGDEGAS SKKGGNSHAG | 100 |
ESNQAGKSKS DQERRKGIAW TEDEHRLFLL GLDKYGKGDW RSISRNFVVT | 150 |
RTPTQVASHA QKYFIRLNSM NKDRRRSSIH DITSVGNADV STPQGPITGQ | 200 |
NNSNNNNNNN NNNSSPAVAG GGNKSAKQAV SQAPPGPPMY GTPAIGQPAV | 250 |
GTPVNLPAPP HMAYGVHAAP VPGSVVPGAA MNIGQMPYTM PRTPTAHR | 300 |
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