Locus |
Common name |
Short description |
AT5G08790 |
ATAF2, ANAC081 |
Arabidopsis NAC domain containing protein 81, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1) |
>AT5G08790.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
798 |
BglII
| A|GATCT |
98 |
HindIII
| A|AGCTT |
695 |
HpaI
| GTT|AAC |
418 |
NcoI
| C|CATGG |
485, 725 |
PvuII
| CAG|CTG |
23 |
StyI
| C|C[AT][AT]GG |
145, 485, 725 |
Click here to view TAIR data
>AT5G08790.1 length:852
ATGAAGTCGG AGCTAAATTT ACCAGCTGGG TTCCGATTCC ATCCAACGGA | 50 |
CGAGGAGCTT GTGAAATTCT ACTTGTGCCG GAAATGTGCT TCCGAGCAGA | 100 |
TCTCGGCTCC GGTTATCGCC GAGATTGATC TCTACAAGTT CAATCCTTGG | 150 |
GAGCTTCCAG AGATGTCTCT GTACGGAGAG AAAGAGTGGT ACTTCTTCTC | 200 |
ACCTAGAGAT CGGAAATACC CAAACGGTTC GCGTCCTAAC CGGGCAGCAG | 250 |
GAACCGGTTA TTGGAAAGCT ACCGGAGCAG ATAAACCGAT TGGTAAACCG | 300 |
AAGACGTTGG GTATCAAGAA AGCACTCGTC TTCTACGCAG GGAAAGCTCC | 350 |
AAAAGGGATT AAGACCAATT GGATAATGCA TGAGTATCGT CTCGCTAATG | 400 |
TTGATAGATC AGCTTCTGTT AACAAAAAGA ACAACCTACG ACTTGATGAT | 450 |
TGGGTTTTAT GTCGAATATA CAACAAGAAA GGAACCATGG AGAAGTATTT | 500 |
CCCCGCGGAT GAGAAGCCGA GGACCACGAC AATGGCTGAA CAGTCATCAT | 550 |
CACCTTTTGA TACATCAGAC TCGACTTACC CGACATTGCA AGAGGATGAT | 600 |
TCCAGCAGCT CAGGTGGTCA CGGTCACGTG GTGTCACCGG ATGTTTTGGA | 650 |
GGTTCAGAGC GAGCCTAAAT GGGGAGAGCT TGAGGATGCT TTGGAAGCTT | 700 |
TTGATACTTC AATGTTTGGT AGTTCCATGG AGTTGTTGCA GCCTGACGCT | 750 |
TTTGTCCCTC AGTTCTTGTA TCAGTCTGAT TATTTCACTT CCTTCCAGGA | 800 |
TCCGCCTGAG CAGAAACCAT TCTTGAATTG GAGTTTTGCT CCACAGGGGT | 850 |
AA | 900 |
>AT5G08790.1 longest ORF length:283
MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW | 50 |
ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP | 100 |
KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD | 150 |
WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD | 200 |
SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA | 250 |
FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG | 300 |
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