fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G08790 ATAF2, ANAC081 Arabidopsis NAC domain containing protein 81, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)

>AT5G08790.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 798
BglII A|GATCT 98
HindIII A|AGCTT 695
HpaI GTT|AAC 418
NcoI C|CATGG 485, 725
PvuII CAG|CTG 23
StyI C|C[AT][AT]GG 145, 485, 725


Click here to view TAIR data

>AT5G08790.1 length:852
ATGAAGTCGG AGCTAAATTT ACCAGCTGGG TTCCGATTCC ATCCAACGGA 
50
CGAGGAGCTT GTGAAATTCT ACTTGTGCCG GAAATGTGCT TCCGAGCAGA 
100
TCTCGGCTCC GGTTATCGCC GAGATTGATC TCTACAAGTT CAATCCTTGG 
150
GAGCTTCCAG AGATGTCTCT GTACGGAGAG AAAGAGTGGT ACTTCTTCTC 
200
ACCTAGAGAT CGGAAATACC CAAACGGTTC GCGTCCTAAC CGGGCAGCAG 
250
GAACCGGTTA TTGGAAAGCT ACCGGAGCAG ATAAACCGAT TGGTAAACCG 
300
AAGACGTTGG GTATCAAGAA AGCACTCGTC TTCTACGCAG GGAAAGCTCC 
350
AAAAGGGATT AAGACCAATT GGATAATGCA TGAGTATCGT CTCGCTAATG 
400
TTGATAGATC AGCTTCTGTT AACAAAAAGA ACAACCTACG ACTTGATGAT 
450
TGGGTTTTAT GTCGAATATA CAACAAGAAA GGAACCATGG AGAAGTATTT 
500
CCCCGCGGAT GAGAAGCCGA GGACCACGAC AATGGCTGAA CAGTCATCAT 
550
CACCTTTTGA TACATCAGAC TCGACTTACC CGACATTGCA AGAGGATGAT 
600
TCCAGCAGCT CAGGTGGTCA CGGTCACGTG GTGTCACCGG ATGTTTTGGA 
650
GGTTCAGAGC GAGCCTAAAT GGGGAGAGCT TGAGGATGCT TTGGAAGCTT 
700
TTGATACTTC AATGTTTGGT AGTTCCATGG AGTTGTTGCA GCCTGACGCT 
750
TTTGTCCCTC AGTTCTTGTA TCAGTCTGAT TATTTCACTT CCTTCCAGGA 
800
TCCGCCTGAG CAGAAACCAT TCTTGAATTG GAGTTTTGCT CCACAGGGGT 
850
AA
900

>AT5G08790.1 longest ORF length:283
MKSELNLPAG FRFHPTDEEL VKFYLCRKCA SEQISAPVIA EIDLYKFNPW 
50
ELPEMSLYGE KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP 
100
KTLGIKKALV FYAGKAPKGI KTNWIMHEYR LANVDRSASV NKKNNLRLDD 
150
WVLCRIYNKK GTMEKYFPAD EKPRTTTMAE QSSSPFDTSD STYPTLQEDD 
200
SSSSGGHGHV VSPDVLEVQS EPKWGELEDA LEAFDTSMFG SSMELLQPDA 
250
FVPQFLYQSD YFTSFQDPPE QKPFLNWSFA PQG
300