fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G09460 bHLH143 sequence-specific DNA binding transcription factors;transcription regulators (.1)

>AT5G09460.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 95
HindIII A|AGCTT 53, 942
PvuII CAG|CTG 128
XbaI T|CTAGA 178


Click here to view TAIR data

>AT5G09460.1 length:981
ATGCCTCTTG ATACCAAACA GCAGAAATGG TTGCCATTAG GCTTAAATCC 
50
TCAAGCTTGT GTCCAGGACA AGGCGACTGA GTATTTCCGT CCTGGAATTC 
100
CTTTTCCGGA ACTCGGTAAA GTTTATGCAG CTGAGCATCA GTTTCGCTAT 
150
TTGCAGCCAC CGTTCCAAGC CTTATTGTCT AGATATGATC AGCAGTCTTG 
200
TGGAAAACAA GTTTCATGTT TGAATGGGCG ATCTAGCAAC GGTGCTGCTC 
250
CAGAGGGGGC ACTCAAGTCT TCTCGGAAAA GATTTATAGT ATTCGATCAG 
300
TCGGGAGAGC AGACTCGTTT GTTACAATGT GGATTTCCTC TGCGGTTTCC 
350
TTCTTCTATG GATGCAGAGC GAGGGAACAT TCTCGGTGCC CTACACCCAG 
400
AGAAAGGGTT TAGTAAAGAT CATGCCATTC AAGAAAAGAT ATTGCAACAT 
450
GAAGATCATG AAAATGGCGA AGAAGACTCG GAAATGCACG AAGACACTGA 
500
GGAAATCAAC GCGTTACTGT ATTCTGATGA TGACGATAAT GATGATTGGG 
550
AAAGTGATGA TGAAGTAATG AGCACTGGTC ACTCTCCATT CACAGTTGAA 
600
CAACAAGCGT GCAACATAAC AACAGAAGAG CTGGATGAAA CTGAAAGCAC 
650
TGTTGATGGT CCACTTCTTA AAAGACAGAA ACTACTGGAC CATTCGTACA 
700
GAGACTCATC ACCATCCCTT GTGGGCACCA CTAAAGTCAA AGGCTTATCA 
750
GATGAAAACC TTCCTGAATC AAACATTTCA AGCAAACAAG AAACGGGTTC 
800
TGGTTTGAGC GACGAGCAGT CAAGAAAAGA CAAGATTCAC ACCGCTCTGA 
850
GAATCCTGGA GAGTGTAGTT CCAGGGGCAA AGGGAAAAGA AGCTCTTTTA 
900
CTACTAGACG AAGCCATTGA TTACCTCAAG TTGCTGAAGC AAAGCTTAAA 
950
CTCATCAAAG GGTTTGAATA ACCATTGGTG A
1000

>AT5G09460.1 longest ORF length:326
MPLDTKQQKW LPLGLNPQAC VQDKATEYFR PGIPFPELGK VYAAEHQFRY 
50
LQPPFQALLS RYDQQSCGKQ VSCLNGRSSN GAAPEGALKS SRKRFIVFDQ 
100
SGEQTRLLQC GFPLRFPSSM DAERGNILGA LHPEKGFSKD HAIQEKILQH 
150
EDHENGEEDS EMHEDTEEIN ALLYSDDDDN DDWESDDEVM STGHSPFTVE 
200
QQACNITTEE LDETESTVDG PLLKRQKLLD HSYRDSSPSL VGTTKVKGLS 
250
DENLPESNIS SKQETGSGLS DEQSRKDKIH TALRILESVV PGAKGKEALL 
300
LLDEAIDYLK LLKQSLNSSK GLNNHW
350