fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G09740 HAM2 histone acetyltransferase of the MYST family 2 (.1.2)

>AT5G09740.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, NcoI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 141, 1236
HindIII A|AGCTT 402
KpnI GGTAC|C 715
NdeI CA|TATG 661
NheI G|CTAGC 1297
PstI CTGCA|G 1268
PvuII CAG|CTG 334
XbaI T|CTAGA 177


Click here to view TAIR data

>AT5G09740.1 length:1338
ATGGGATCGT CAGCGAATAC AGAAACCAAC GGCAACGCAC CGCCACCGTC 
50
GTCGAATCAA AAGCCTCCGG CTACGAACGG CGTTGATGGG TCTCATCCTC 
100
CTCCTCCTCC TTTAACTCCT GATCAAGCTA TTATAGAGTC GGATCCGTCG 
150
AAGAAGAGGA AAATGGGGAT GCTTCCTCTA GAAGTGGGTA CTCGTGTGAT 
200
GTGTCGGTGG AGAGACGGGA AACACCATCC GGTGAAAGTA ATTGAGCGCC 
250
GGCGGATACA TAACGGCGGT CAAAATGATT ACGAGTATTA CGTTCATTAC 
300
ACTGAGTTTA ATAGGAGGCT GGATGAATGG ACTCAGCTGG ACCAACTGGA 
350
CCTTGATTCA GTAGAGTGCG CTGTAGATGA AAAAGTGGAA GACAAGGTAA 
400
CAAGCTTGAA GATGACACGT CACCAGAAGA GGAAGATCGA TGAGACACAT 
450
ATAGAGGGTC ATGAAGAGCT GGATGCAGCA AGTTTGCGTG AACATGAAGA 
500
GTTCACGAAA GTGAAGAACA TATCAACAAT TGAGCTTGGA AAATATGAGA 
550
TTGAGACTTG GTACTTCTCC CCTTTTCCGC CAGAATACAA TGACTGTGTG 
600
AAGCTCTTTT TTTGTGAGTT TTGCCTGAAC TTCATGAAAC GCAAAGAGCA 
650
GCTTCAAAGG CATATGAGGA AGTGTGACCT GAAGCACCCA CCTGGTGATG 
700
AAATTTACCG AAGTGGTACC TTGTCAATGT TTGAGGTAGA TGGCAAAAAG 
750
AACAAGGTTT ATGCACAGAA TCTCTGCTAC CTGGCAAAGT TATTTCTTGA 
800
CCACAAAACT CTTTACTACG ATGTTGATTT GTTTCTATTC TACGTTCTTT 
850
GCGAATGTGA TGACCGAGGA TGCCACATGG TTGGGTACTT TTCAAAGGAG 
900
AAGCATTCGG AAGAAGCATA CAACTTAGCT TGCATTCTAA CCCTGCCTTC 
950
ATATCAAAGA AAAGGCTATG GAAAGTTCTT AATAGCCTTT TCCTATGAAC 
1000
TGTCAAAGAA AGAGGGAAAA GTTGGGACAC CGGAAAGACC CTTGTCGGAT 
1050
CTAGGCTTAC TAAGCTACAG AGGTTATTGG ACTCGTGTTC TATTAGAAAT 
1100
CTTGAAAAAA CATAAGGGAA ACATTTCTAT CAAGGAGCTG AGCGACGTGA 
1150
CAGCAATCAA AGCGGAAGAT ATATTAAGCA CACTTCAGAG CCTAGAACTG 
1200
ATACAGTACA GGAAAGGACA GCATGTGATC TGTGCGGATC CAAAGGTTCT 
1250
GGACCGACAT CTGAAAGCTG CAGGCCGAGG TGGTCTTGAT GTAGATGCTA 
1300
GCAAACTGAT TTGGACACCT TACAAGGACC AGAGTTAA
1350

>AT5G09740.1 longest ORF length:445
MGSSANTETN GNAPPPSSNQ KPPATNGVDG SHPPPPPLTP DQAIIESDPS 
50
KKRKMGMLPL EVGTRVMCRW RDGKHHPVKV IERRRIHNGG QNDYEYYVHY 
100
TEFNRRLDEW TQLDQLDLDS VECAVDEKVE DKVTSLKMTR HQKRKIDETH 
150
IEGHEELDAA SLREHEEFTK VKNISTIELG KYEIETWYFS PFPPEYNDCV 
200
KLFFCEFCLN FMKRKEQLQR HMRKCDLKHP PGDEIYRSGT LSMFEVDGKK 
250
NKVYAQNLCY LAKLFLDHKT LYYDVDLFLF YVLCECDDRG CHMVGYFSKE 
300
KHSEEAYNLA CILTLPSYQR KGYGKFLIAF SYELSKKEGK VGTPERPLSD 
350
LGLLSYRGYW TRVLLEILKK HKGNISIKEL SDVTAIKAED ILSTLQSLEL 
400
IQYRKGQHVI CADPKVLDRH LKAAGRGGLD VDASKLIWTP YKDQS
450