fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G09740 HAM2 histone acetyltransferase of the MYST family 2 (.1.2)

>AT5G09740.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 141, 1002
HindIII A|AGCTT 402
NheI G|CTAGC 1063
PstI CTGCA|G 1034
PvuII CAG|CTG 334
XbaI T|CTAGA 177


Click here to view TAIR data

>AT5G09740.2 length:1104
ATGGGATCGT CAGCGAATAC AGAAACCAAC GGCAACGCAC CGCCACCGTC 
50
GTCGAATCAA AAGCCTCCGG CTACGAACGG CGTTGATGGG TCTCATCCTC 
100
CTCCTCCTCC TTTAACTCCT GATCAAGCTA TTATAGAGTC GGATCCGTCG 
150
AAGAAGAGGA AAATGGGGAT GCTTCCTCTA GAAGTGGGTA CTCGTGTGAT 
200
GTGTCGGTGG AGAGACGGGA AACACCATCC GGTGAAAGTA ATTGAGCGCC 
250
GGCGGATACA TAACGGCGGT CAAAATGATT ACGAGTATTA CGTTCATTAC 
300
ACTGAGTTTA ATAGGAGGCT GGATGAATGG ACTCAGCTGG ACCAACTGGA 
350
CCTTGATTCA GTAGAGTGCG CTGTAGATGA AAAAGTGGAA GACAAGGTAA 
400
CAAGCTTGAA GATGACACGT CACCAGAAGA GGAAGATCGA TGAGACACAT 
450
ATAGAGGGTC ATGAAGAGCT GGATGCAGCA AGTTTGCGTG AACATGAAGA 
500
GTTCACGAAA GTGAAGAACA AGGTTTATGC ACAGAATCTC TGCTACCTGG 
550
CAAAGTTATT TCTTGACCAC AAAACTCTTT ACTACGATGT TGATTTGTTT 
600
CTATTCTACG TTCTTTGCGA ATGTGATGAC CGAGGATGCC ACATGGTTGG 
650
GTACTTTTCA AAGGAGAAGC ATTCGGAAGA AGCATACAAC TTAGCTTGCA 
700
TTCTAACCCT GCCTTCATAT CAAAGAAAAG GCTATGGAAA GTTCTTAATA 
750
GCCTTTTCCT ATGAACTGTC AAAGAAAGAG GGAAAAGTTG GGACACCGGA 
800
AAGACCCTTG TCGGATCTAG GCTTACTAAG CTACAGAGGT TATTGGACTC 
850
GTGTTCTATT AGAAATCTTG AAAAAACATA AGGGAAACAT TTCTATCAAG 
900
GAGCTGAGCG ACGTGACAGC AATCAAAGCG GAAGATATAT TAAGCACACT 
950
TCAGAGCCTA GAACTGATAC AGTACAGGAA AGGACAGCAT GTGATCTGTG 
1000
CGGATCCAAA GGTTCTGGAC CGACATCTGA AAGCTGCAGG CCGAGGTGGT 
1050
CTTGATGTAG ATGCTAGCAA ACTGATTTGG ACACCTTACA AGGACCAGAG 
1100
TTAA
1150

>AT5G09740.2 longest ORF length:367
MGSSANTETN GNAPPPSSNQ KPPATNGVDG SHPPPPPLTP DQAIIESDPS 
50
KKRKMGMLPL EVGTRVMCRW RDGKHHPVKV IERRRIHNGG QNDYEYYVHY 
100
TEFNRRLDEW TQLDQLDLDS VECAVDEKVE DKVTSLKMTR HQKRKIDETH 
150
IEGHEELDAA SLREHEEFTK VKNKVYAQNL CYLAKLFLDH KTLYYDVDLF 
200
LFYVLCECDD RGCHMVGYFS KEKHSEEAYN LACILTLPSY QRKGYGKFLI 
250
AFSYELSKKE GKVGTPERPL SDLGLLSYRG YWTRVLLEIL KKHKGNISIK 
300
ELSDVTAIKA EDILSTLQSL ELIQYRKGQH VICADPKVLD RHLKAAGRGG 
350
LDVDASKLIW TPYKDQS
400