fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G09750 HEC3, bHLH043 HECATE 3, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G09750.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 437
HindIII A|AGCTT 584
NcoI C|CATGG 131
StyI C|C[AT][AT]GG 131
XbaI T|CTAGA 264


Click here to view TAIR data

>AT5G09750.1 length:675
ATGAATAATT ATAATATGAA CCCATCTCTC TTCCAAAATT ACACTTGGAA 
50
CAACATCATC AACAGCAGCA ACAACAACAA CAAGAATGAT GATCATCATC 
100
ATCAACATAA TAATGATCCA ATCGGTATGG CCATGGACCA GTACACACAG 
150
CTCCATATCT TCAATCCTTT CTCTTCTTCT CATTTCCCTC CTCTCTCTTC 
200
TTCCCTCACA ACCACCACTC TTCTCTCCGG AGATCAAGAA GACGACGAAG 
250
ACGAAGAAGA ACCTCTAGAG GAACTCGGTG CTATGAAGGA AATGATGTAC 
300
AAGATCGCAG CCATGCAATC GGTTGACATC GACCCAGCAA CCGTCAAGAA 
350
ACCCAAACGC CGTAACGTGA GGATCTCCGA CGACCCTCAG AGTGTGGCGG 
400
CTAGACATCG CCGTGAGAGA ATCAGTGAGA GGATCAGAAT TCTTCAGAGA 
450
CTCGTGCCAG GTGGCACTAA AATGGATACG GCTTCAATGC TCGATGAAGC 
500
TATACGCTAT GTCAAGTTCT TGAAACGGCA GATCCGGCTA CTCAATAATA 
550
ATACCGGATA TACTCCTCCG CCGCCGCAAG ATCAAGCTTC TCAGGCGGTG 
600
ACGACGTCAT GGGTTTCACC GCCACCACCG CCAAGTTTCG GCCGTGGGGG 
650
AAGAGGAGTA GGAGAATTAA TCTAG
700

>AT5G09750.1 longest ORF length:224
MNNYNMNPSL FQNYTWNNII NSSNNNNKND DHHHQHNNDP IGMAMDQYTQ 
50
LHIFNPFSSS HFPPLSSSLT TTTLLSGDQE DDEDEEEPLE ELGAMKEMMY 
100
KIAAMQSVDI DPATVKKPKR RNVRISDDPQ SVAARHRRER ISERIRILQR 
150
LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL LNNNTGYTPP PPQDQASQAV 
200
TTSWVSPPPP PSFGRGGRGV GELI
250