Locus |
Common name |
Short description |
AT5G09750 |
HEC3, bHLH043 |
HECATE 3, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT5G09750.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
437 |
HindIII
| A|AGCTT |
584 |
NcoI
| C|CATGG |
131 |
StyI
| C|C[AT][AT]GG |
131 |
XbaI
| T|CTAGA |
264 |
Click here to view TAIR data
>AT5G09750.1 length:675
ATGAATAATT ATAATATGAA CCCATCTCTC TTCCAAAATT ACACTTGGAA | 50 |
CAACATCATC AACAGCAGCA ACAACAACAA CAAGAATGAT GATCATCATC | 100 |
ATCAACATAA TAATGATCCA ATCGGTATGG CCATGGACCA GTACACACAG | 150 |
CTCCATATCT TCAATCCTTT CTCTTCTTCT CATTTCCCTC CTCTCTCTTC | 200 |
TTCCCTCACA ACCACCACTC TTCTCTCCGG AGATCAAGAA GACGACGAAG | 250 |
ACGAAGAAGA ACCTCTAGAG GAACTCGGTG CTATGAAGGA AATGATGTAC | 300 |
AAGATCGCAG CCATGCAATC GGTTGACATC GACCCAGCAA CCGTCAAGAA | 350 |
ACCCAAACGC CGTAACGTGA GGATCTCCGA CGACCCTCAG AGTGTGGCGG | 400 |
CTAGACATCG CCGTGAGAGA ATCAGTGAGA GGATCAGAAT TCTTCAGAGA | 450 |
CTCGTGCCAG GTGGCACTAA AATGGATACG GCTTCAATGC TCGATGAAGC | 500 |
TATACGCTAT GTCAAGTTCT TGAAACGGCA GATCCGGCTA CTCAATAATA | 550 |
ATACCGGATA TACTCCTCCG CCGCCGCAAG ATCAAGCTTC TCAGGCGGTG | 600 |
ACGACGTCAT GGGTTTCACC GCCACCACCG CCAAGTTTCG GCCGTGGGGG | 650 |
AAGAGGAGTA GGAGAATTAA TCTAG | 700 |
>AT5G09750.1 longest ORF length:224
MNNYNMNPSL FQNYTWNNII NSSNNNNKND DHHHQHNNDP IGMAMDQYTQ | 50 |
LHIFNPFSSS HFPPLSSSLT TTTLLSGDQE DDEDEEEPLE ELGAMKEMMY | 100 |
KIAAMQSVDI DPATVKKPKR RNVRISDDPQ SVAARHRRER ISERIRILQR | 150 |
LVPGGTKMDT ASMLDEAIRY VKFLKRQIRL LNNNTGYTPP PPQDQASQAV | 200 |
TTSWVSPPPP PSFGRGGRGV GELI | 250 |
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